Gene omics information

Query gene ID	TaAffx.64914.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.64914.1.S1_at	BJ270115	-	-	4e+0	At1g51915	cryptdin protein-related	S.X.	H.G.	Please select
0.60	81.0	TaAffx.108544.1.S1_x_at	CA663841	-	-	1e+1	At4g27270	quinone reductase family protein	S.X.	H.G.	Please select
0.57	79.2	TaAffx.108544.1.S1_at	CA663841	-	-	1e+1	At4g27270	quinone reductase family protein	S.X.	H.G.	Please select
0.46	66.8	Ta.19591.2.A1_a_at	CA651113	-	-	4e+0	At5g11500	unknown protein	S.X.	H.G.	Please select
0.44	64.5	Ta.2138.2.S1_at	CA632124	-	-	1e+0	At1g55840	SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein	S.X.	H.G.	Please select
0.31	42.7	TaAffx.105981.1.S1_at	CA727065	-	-	3e-1	At4g11870	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
48.2	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
18.0	99.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
13.9	99.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.4	99.2	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.8	97.9	GSM138205	genotype H8 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.7	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	TaAffx.11845.1.S1_at	BJ320513	-	-	6e+0	At5g63470	NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.106699.1.S1_at	CA713407	-	-	2e-1	At2g23670	YCF37 (Arabidopsis homolog of Synechocystis YCF37)	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.10216.1.A1_at	BJ250809	-	-	5e+0	At5g03660	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.14990.1.S1_at	BE213601	-	-	2e+0	At3g01070	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.9356.1.S1_at	CD911368	-	-	3e+0	At2g20940	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.89318.1.S1_at	CA685770	-	-	1e+0	At4g16710	glycosyltransferase family protein 28	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.80644.1.S1_at	CA694488	-	-	3e-2	At3g09960	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.59742.1.S1_x_at	CA596026	-	-	2e-2	At2g30560	glycine-rich protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.59742.1.S1_at	CA596026	-	-	2e-2	At2g30560	glycine-rich protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At1g51915	841619	cryptdin protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.5922.2.S1_at	BM528261	-	-	9e-1	At3g09590	pathogenesis-related protein, putative	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	HU09D18u_s_at	HU09D18u	nucellin-like aspartic protease-like	-	3e+0	At3g50460	HR2 (HOMOLOG OF RPW8 2)	C.G.	S.X.	Please select
0.03	1e-1	38	Oryza sativa	Os01g0156800	9629.m00565	-	-	1e+0	At5g58650	PSY1 (plant peptide containing sulfated tyrosine 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	PtpAffx.18509.1.A1_at	CV244180	-	-	9e-2	At1g01110	IQD18 (IQ-domain 18)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1618771_s_at	CD715283	hypothetical protein LOC100262843	-	3e-4	At1g25560	TEM1 (TEMPRANILLO 1)	C.G.	S.X.	Please select
0.04	5e-1	34	Zea mays	Zm.8828.1.A1_at	BM075809	hypothetical protein LOC100191533	-	1e+0	At3g63095	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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