CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.64816.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 79.8 TaAffx.64816.1.A1_at BJ274338 - - 4e+0 At2g33800 ribosomal protein S5 family protein S.X. H.G.
0.80 92.2 Ta.28109.1.A1_at CA617283 - - 8e-2 At4g23430 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.73 89.1 Ta.4018.1.S1_at CD888469 - - 7e-4 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.60 81.0 Ta.12323.1.A1_at BQ172096 - - 6e+0 Atcg00050 - S.X. H.G.
0.27 35.6 Ta.4702.2.S1_at BJ270807 - - 2e-4 At5g49820 emb1879 (embryo defective 1879) S.X. H.G.
0.27 35.6 AFFX-Tae-r2-Bs-lys-5_at AFFX-Tae-r2-Bs-lys-5 - - 0 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.7 99.9 GSM139927 Anther tetrads rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
30.5 99.9 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
30.0 99.8 GSM139925 Anther tetrads rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
24.1 99.8 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
20.5 99.7 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3 97.6 GSM111187 genotype B68 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3 96.7 GSM138187 genotype F38b developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5 95.4 GSM138210 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1 94.5 GSM138181 genotype A35 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7 93.3 GSM138209 genotype H23 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 5e-6 52 TaAffx.65529.1.A1_at BJ241743 - - 4e+0 At5g11630 unknown protein C.G. S.X.
0.02 1e+0 34 Ta.23414.1.S1_x_at CD452900 - - 3e+0 At5g16990 NADP-dependent oxidoreductase, putative C.G. S.X.
0.02 1e+0 34 Ta.23414.1.S1_at CD452900 - - 3e+0 At5g16990 NADP-dependent oxidoreductase, putative C.G. S.X.
0.03 4e+0 32 TaAffx.8217.1.S1_at CA631455 - - 4e-3 At1g12830 unknown protein C.G. S.X.
0.03 4e+0 32 TaAffx.53282.1.S1_at CA694151 - - 3e-1 At1g49880 Erv1/Alr family protein C.G. S.X.
0.03 4e+0 32 Ta.8286.1.A1_at BQ161693 - - 8e-1 At1g15930 40S ribosomal protein S12 (RPS12A) C.G. S.X.
0.01 4e+0 32 Ta.12233.1.A1_at CD937605 - - 3e+0 At5g04910 unknown protein C.G. S.X.
0.03 2e+1 30 TaAffx.91236.1.A1_at BQ172341 - - 4e+0 At2g39840 TOPP4 C.G. S.X.
0.03 2e+1 30 TaAffx.86848.1.S1_at CA731403 - - 5e+0 At5g40350 MYB24 (myb domain protein 24) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At2g33800 817947 ribosomal protein S5 family protein F:structural constituent of ribosome, RNA binding;P:response to cadmium ion, response to cold, translation;C:in 8 components;BOMAFP - - - C.G. S.X.
0.03 6e+0 32 Glycine max GmaAffx.56190.1.A1_at BU549029 - - 4e+0 At1g29780 NLI interacting factor (NIF) family protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HY05P20u_at HY05P20u - - 4e+0 At1g16022 unknown protein C.G. S.X.
0.02 8e+0 32 Oryza sativa Os02g0492300 9630.m02773 - - 2e+0 At1g31320 LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.205952.1.S1_at pmrna11815 hypothetical protein - 3e+0 At5g62750 unknown protein C.G. S.X.
0.03 2e+1 28 Vitis vinifera 1620779_at CB347084 - - 2e+0 At2g09840 - C.G. S.X.
0.03 7e+0 30 Zea mays Zm.6361.1.A1_at CF056616 hypothetical protein LOC100191511 - 2e-2 At3g58030 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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