Gene omics information

Query gene ID	TaAffx.64664.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.43	62.2	TaAffx.64664.1.S1_at	BJ282283	-	-	1e+0	At3g60660	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.28488.1.S1_at	CK205419	-	-	6e+0	At3g10990	F-box family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.1574.1.S1_s_at	BQ744318	-	-	6e+0	At4g27780	ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.6284.1.S1_at	CA688900	-	-	3e+0	At3g62528	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.22548.1.S1_a_at	CA684451	Zinc transporter-like	-	1e-4	At4g33020	ZIP9	S.X.	H.G.	Please select
0.30	40.9	Ta.30640.1.S1_at	CD861747	-	-	2e+0	At4g20370	TSF (TWIN SISTER OF FT)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
52.0	99.9	GSM143501	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
25.3	99.8	GSM143493	Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
24.5	99.8	GSM143500	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
23.4	99.8	GSM143498	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
23.4	99.8	GSM143499	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
17.0	99.6	GSM143490	Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.7	99.3	GSM143495	Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.2	99.2	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
9.5	99.1	GSM143492	Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.8	98.7	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-2	40	TaAffx.128471.1.S1_at	BG314138	-	-	1e-1	At1g44542	cyclase family protein	C.G.	S.X.	Please select
0.02	2e-2	40	Ta.3640.1.S1_at	CD454517	-	-	2e-5	At1g62400	HT1 (high leaf temperature 1)	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.25221.1.S1_at	CD454610	-	-	1e-1	At5g19340	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.21279.1.S1_s_at	CA613838	-	-	8e-14	At1g20380	prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.50947.1.S1_at	CA733029	-	-	2e-5	At1g71020	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.25895.1.S1_at	CA694545	-	-	3e-4	At5g18660	PCB2 (PALE-GREEN AND CHLOROPHYLL B REDUCED 2)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.25397.1.S1_at	CD452506	-	-	5e-2	At1g61610	S-locus lectin protein kinase family protein	C.G.	S.X.	Please select
0.04	1e+0	34	Ta.21353.3.S1_x_at	CA655826	-	-	4e+0	At4g02220	zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein	C.G.	S.X.	Please select
0.04	1e+0	34	Ta.21353.3.S1_at	CA655826	-	-	4e+0	At4g02220	zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At3g60660	825237	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-3	44	Glycine max	PsAffx.CL1226Contig1_at	PsAffx.CL1226Contig1	-	-	2e+0	At1g12440	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	HV_CEb0016H05f2_at	HV_CEb0016H05f2	-	-	4e-1	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	C.G.	S.X.	Please select
0.25	2e-86	319	Oryza sativa	Os04g0561500	AK065953.1	-	Prolyl endopeptidase (EC 3.4.21.26) (Post-prolinecleaving enzyme) (PE)	1e-19	At1g76140	serine-type endopeptidase/ serine-type peptidase	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.216765.1.S1_at	pmrna31751	hypothetical protein	-	6e-2	At3g25590	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1622732_at	CF372633	hypothetical protein LOC100247887	-	3e-10	At5g60460	sec61beta family protein	C.G.	S.X.	Please select
0.04	5e-1	34	Zea mays	ZmAffx.1179.1.A1_at	AW927503	-	-	1e+1	Atmg01060	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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