Gene omics information

Query gene ID	TaAffx.64591.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	TaAffx.64591.1.S1_at	BJ288225	-	-	1e+0	At1g19010	unknown protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.56155.1.S1_at	CA656564	-	-	1e+1	At5g26070	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.112158.1.S1_x_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select
0.38	54.7	Ta.3203.2.S1_x_at	CA621738	-	-	5e-6	At1g27530	-	S.X.	H.G.	Please select
0.38	54.7	TaAffx.30673.1.S1_at	CA623010	-	-	7e-11	At4g25630	FIB2 (FIBRILLARIN 2)	S.X.	H.G.	Please select
0.27	35.6	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.0	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.9	99.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM138144	Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
2.6	92.9	GSM246384	SB165_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	5e-6	52	Ta.9801.1.A1_at	BJ237616	-	-	1e+0	At1g58420	-	C.G.	S.X.	Please select
0.01	3e-1	36	Ta.3509.1.S1_at	CK200929	-	-	4e-13	At5g26830	threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.1683.1.S1_x_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.1683.1.S1_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.7807.1.S1_at	CA649099	-	-	3e+0	At5g49120	senescence-associated protein-related	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.110511.1.S1_at	CA658265	-	-	4e-3	At4g32020	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.104952.1.S1_at	CA742464	-	-	5e-1	At2g38780	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.8141.3.S1_a_at	CA611515	-	-	9e-2	At5g03660	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.8141.3.S1_x_at	CA611515	-	-	9e-2	At5g03660	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At1g19010	838482	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	Gma.12857.1.S1_at	BM526382	-	-	2e-1	At3g22820	allergen-related	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	HA05i14r_at	HA05i14r	-	-	3e+0	At2g29420	ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)	C.G.	S.X.	Please select
0.03	5e-1	36	Oryza sativa	Os05g0142000	AK071647.1	-	Conserved hypothetical protein	3e-1	At1g35830	VQ motif-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e-1	36	Populus trichocarpa	Ptp.7824.1.S1_at	CA925640	NAC domain protein, IPR003441	-	8e-2	At1g72770	HAB1 (HOMOLOGY TO ABI1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1619633_at	CD800375	hypothetical protein LOC100250541	-	2e-1	At4g24400	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8)	C.G.	S.X.	Please select
0.04	1e-1	36	Zea mays	Zm.13290.1.S1_at	CA826624	-	-	9e-1	At3g27835	-	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage