Gene omics information

Query gene ID	TaAffx.61855.2.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.61855.2.S1_at	CA614570	-	-	4e+0	At3g44150	unknown protein	S.X.	H.G.	Please select
0.71	88.0	TaAffx.61855.2.S1_x_at	CA614570	-	-	4e+0	At3g44150	unknown protein	S.X.	H.G.	Please select
0.71	88.0	Ta.16493.1.A1_s_at	CA607256	-	-	3e-1	At1g78410	VQ motif-containing protein	S.X.	H.G.	Please select
0.40	58.4	Ta.30414.1.S1_at	CA606112	-	-	4e-21	At4g27880	seven in absentia (SINA) family protein	S.X.	H.G.	Please select
0.29	39.2	Ta.28571.1.S1_s_at	CA639817	-	-	8e-5	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.26	33.6	Ta.28311.2.S1_x_at	CA630222	Plasma membrane H+-ATPase subunit H	-	6e-5	At4g26710	ATP synthase subunit H family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.3	97.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM138163	genotype E5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.86	0	801	TaAffx.61855.2.S1_x_at	CA614570	-	-	4e+0	At3g44150	unknown protein	C.G.	S.X.	Please select
0.10	8e-11	67	Ta.9258.3.S1_a_at	CA636527	-	-	4e-3	At3g11800	unknown protein	C.G.	S.X.	Please select
0.06	2e-2	40	TaAffx.84061.1.S1_at	CA645676	-	-	4e+0	At3g24506	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.23050.2.A1_x_at	BJ295866	-	-	2e-15	At5g15200	40S ribosomal protein S9 (RPS9B)	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.23050.2.A1_at	BJ295866	-	-	2e-15	At5g15200	40S ribosomal protein S9 (RPS9B)	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.112372.1.S1_at	CA623761	-	-	3e-7	At1g60970	clathrin adaptor complex small chain family protein	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.85855.1.S1_x_at	CA619003	-	-	5e-1	At1g74448	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.85855.1.S1_at	CA619003	-	-	5e-1	At1g74448	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.122621.1.S1_at	CA600291	-	-	2e-2	At1g12630	DNA binding / transcription activator/ transcription factor	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At3g44150	823536	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-2	40	Glycine max	Gma.1398.3.S1_at	BM887324	-	-	8e-14	At1g16080	unknown protein	C.G.	S.X.	Please select
0.51	1e-51	202	Hordeum vulgare	Contig10643_at	Contig10643	-	-	1e-1	At1g48140	dolichol-phosphate mannosyltransferase-related	C.G.	S.X.	Please select
0.14	6e-13	75	Oryza sativa	OsAffx.13345.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	6e+0	32	Populus trichocarpa	PtpAffx.86866.1.A1_at	DN486927	-	-	5e+0	At4g10845	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1617404_at	BQ799079	hypothetical protein LOC100243328	-	4e-3	At5g48680	sterile alpha motif (SAM) domain-containing protein	C.G.	S.X.	Please select
0.11	1e-10	65	Zea mays	Zm.6337.1.S1_a_at	CD439345	hypothetical protein LOC100273005 /// expp1 protein	-	3e-3	At3g44150	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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