Gene omics information

Query gene ID	TaAffx.6157.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.6157.1.S1_at	CA690748	-	-	4e+0	At2g42930	glycosyl hydrolase family protein 17	S.X.	H.G.	Please select
0.60	81.0	TaAffx.4857.1.S1_at	CA730111	-	-	4e+0	At1g77682	-	S.X.	H.G.	Please select
0.50	72.4	Ta.21581.1.S1_at	CA696527	-	-	4e+0	At2g36460	fructose-bisphosphate aldolase, putative	S.X.	H.G.	Please select
0.35	49.8	TaAffx.55653.1.S1_at	CA663094	-	-	1e+1	At4g20030	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.118620.1.S1_at	BJ316617	-	-	1e+0	At2g31560	unknown protein	S.X.	H.G.	Please select
0.25	32.1	Ta.6759.2.S1_at	BJ211299	-	-	2e+0	At5g63310	NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.2	99.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
16.7	99.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
16.2	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
15.9	99.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.5	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
12.4	99.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.9	99.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	4e-120	430	Ta.20001.1.A1_at	AJ615042	-	-	2e+1	At5g64620	C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2)	C.G.	S.X.	Please select
0.04	1e-6	54	Ta.8006.2.S1_x_at	BJ308313	-	-	1e-4	At5g54680	ILR3 (iaa-leucine resistant3)	C.G.	S.X.	Please select
0.07	2e-5	50	TaAffx.6140.1.S1_s_at	CA690954	Photosystem II polypeptide	-	3e+1	At5g45410	unknown protein	C.G.	S.X.	Please select
0.03	2e-5	50	Ta.27492.1.S1_at	BT009358.1	-	-	2e+0	At5g53592	-	C.G.	S.X.	Please select
0.06	2e-5	50	Ta.20794.2.S1_a_at	CA683454	-	-	7e-1	At5g50680	SAE1B (SUMO ACTIVATING ENZYME 1B)	C.G.	S.X.	Please select
0.06	2e-5	50	Ta.20794.2.S1_x_at	CA683454	-	-	7e-1	At5g50680	SAE1B (SUMO ACTIVATING ENZYME 1B)	C.G.	S.X.	Please select
0.05	7e-5	48	TaAffx.81591.1.S1_at	CA684254	-	-	1e+0	At5g56850	unknown protein	C.G.	S.X.	Please select
0.04	7e-5	48	TaAffx.81169.1.S1_at	CA688972	-	-	6e+0	At2g01660	PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)	C.G.	S.X.	Please select
0.05	7e-5	48	TaAffx.81255.1.S1_at	CA688033	-	-	9e-1	At3g12880	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At2g42930	818894	glycosyl hydrolase family protein 17	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	4e-4	46	Glycine max	Gma.6022.1.S1_at	BQ611041	-	-	2e+0	At5g41850	unknown protein	C.G.	S.X.	Please select
0.06	3e-5	48	Hordeum vulgare	Contig19902_at	Contig19902	-	-	8e+0	At5g16120	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.05	5e-1	36	Oryza sativa	OsAffx.31729.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-3	44	Populus trichocarpa	PtpAffx.7182.3.A1_a_at	CV253214	hypothetical protein	-	6e-3	At1g79390	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-4	44	Vitis vinifera	1617182_at	CB921793	-	-	5e-3	At1g62240	unknown protein	C.G.	S.X.	Please select
0.05	1e-4	46	Zea mays	Zm.9008.2.S1_at	AI665626	-	-	3e+0	At3g27080	TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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