Gene omics information

Query gene ID TaAffx.59306.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6583.9TaAffx.59306.1.S1_atCA603735--1e+0At4g22570APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)S.X.H.G.
0.4565.2Ta.9084.3.S1_atCA666296--1e+1At5g50050invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.4464.5Ta.3203.2.S1_x_atCA621738--5e-6At1g27530-S.X.H.G.
0.4260.9TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinS.X.H.G.
0.3753.0TaAffx.16699.2.S1_x_atCA682179--4e+0At5g36130cytochrome P450 familyS.X.H.G.
0.3651.9TaAffx.56155.1.S1_atCA656564--1e+1At5g26070hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.3651.9Ta.12360.1.A1_atCA648024--4e+0At1g70220unknown proteinS.X.H.G.
0.3651.9TaAffx.30598.1.S1_atCA623743--1e+0At3g05230signal peptidase subunit family proteinS.X.H.G.
0.3244.4TaAffx.112465.1.S1_s_atCA623726--3e-13At4g00360CYP86A2 (CYTOCHROME P450 86 A2)S.X.H.G.
0.3040.9TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.099.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
7.798.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
7.698.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.196.4GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
3.795.8GSM143518Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.595.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.595.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.595.4GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.495.2GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.294.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.538e-125446Ta.3607.1.S1_atCK199565--5e-10At3g05230signal peptidase subunit family proteinC.G.S.X.
0.522e-119428Ta.3607.2.S1_atCA695720--7e-5At5g27430signal peptidase subunit family proteinC.G.S.X.
0.062e-240TaAffx.81725.1.S1_atCA682598--1e+0At2g35640hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.042e-240Ta.7287.1.S1_atCA653184--8e+0At5g34581hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.062e-240Ta.7287.3.S1_atCA603074--1e+0At2g35640hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.062e-240Ta.14718.1.S1_atCA680833--2e+1At4g17190FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)C.G.S.X.
0.047e-238TaAffx.9177.2.S1_atCA606557--3e+0At5g65220ribosomal protein L29 family proteinC.G.S.X.
0.057e-238TaAffx.81608.1.S1_atCA684076--4e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.037e-238Ta.10129.1.S1_atCA648907--1e-4At5g39510SGR4 (SHOOT GRAVITROPSIM 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt4g22570828353APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.---C.G.S.X.
0.091e-138Glycine maxGma.6806.2.S1_a_atBE806131--9e-13At3g05230signal peptidase subunit family proteinC.G.S.X.
0.343e-24111Hordeum vulgareContig26495_atContig26495--6e-5At5g27430signal peptidase subunit family proteinC.G.S.X.
0.222e-49196Oryza sativaOs.16822.1.S1_at---0C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.200210.1.S1_x_atpmrna396hypothetical protein-9e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.041e+032Vitis vinifera1618756_atCB977044hypothetical protein LOC100260418-3e-3At5g61150VIP4 (VERNALIZATION INDEPENDENCE 4)C.G.S.X.
0.031e-136Zea maysZm.2267.2.S1_atAW330896hypothetical protein LOC100216854-6e+0At4g14740phosphoinositide bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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