Gene omics information

Query gene ID TaAffx.59237.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.59237.1.S1_atCA605498--3e-1At4g36570ATRL3 (ARABIDOPSIS RAD-LIKE 3)S.X.H.G.
0.2532.1Ta.13862.1.S1_x_atCA621701--2e+0At2g04790unknown proteinS.X.H.G.
0.1011.3Ta.14146.3.S1_x_atCA697368--2e+1At5g24313unknown proteinS.X.H.G.
0.0910.4TaAffx.51397.1.S1_atCA725473--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)S.X.H.G.
0.0910.4TaAffx.29911.1.S1_atCA632981--2e+1At5g09470mitochondrial substrate carrier family proteinS.X.H.G.
0.045.8TaAffx.112158.1.S1_atCA626538--2e+1At3g28590unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.999.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.699.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.999.4GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.399.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
11.199.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
8.798.9GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.398.8GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.098.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
6.998.4GSM138191genotype D39 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.998.0GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.182e-1789TaAffx.22820.1.S1_atCA744604--1e+0At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
0.155e-961TaAffx.9110.1.S1_atCA612098--4e+0At1g55615unknown proteinC.G.S.X.
0.031e+034Ta.10516.1.A1_atBQ168527--6e+0At5g57910unknown proteinC.G.S.X.
0.034e+032TaAffx.83616.2.S1_atCA599476--1e+0At3g32904unknown proteinC.G.S.X.
0.034e+032TaAffx.37579.1.A1_atBJ272804--4e+0At5g38060unknown proteinC.G.S.X.
0.034e+032TaAffx.31085.1.S1_atCA619621--1e+0At4g13940MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)C.G.S.X.
0.024e+032TaAffx.129139.2.S1_atCA642451--2e-3At1g08370DCP1 (decapping 1)C.G.S.X.
0.024e+032TaAffx.129139.2.S1_x_atCA642451--2e-3At1g08370DCP1 (decapping 1)C.G.S.X.
0.014e+032TaAffx.114210.1.S1_atCA604152--2e-1At1g54320LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Arabidopsis thalianaAt4g36570829809ATRL3 (ARABIDOPSIS RAD-LIKE 3)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;PMO---C.G.S.X.
0.032e+034Glycine maxGmaAffx.92723.1.S1_x_atCF808448--3e-62At3g2339060S ribosomal protein L36a/L44 (RPL36aA)C.G.S.X.
0.189e-959Hordeum vulgareHU11J18u_x_atHU11J18u--4e+0At2g04020GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.112e-22107Oryza sativaOs08g0511700AK065422.1-Leucine-rich repeat, typical subtype containingprotein2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.033e-550Populus trichocarpaPtpAffx.205285.1.S1_atpmrna10476hypothetical protein-3e-19At4g35470leucine-rich repeat family proteinC.G.S.X.
0.035e+030Vitis vinifera1617540_atCF210948--4e+0At2g28105-C.G.S.X.
0.473e-156549Zea maysZm.7595.1.A1_atCD437071--6e+0At4g27360dynein light chain, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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