CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.58795.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 98.5 TaAffx.58795.1.S1_at CA615520 - - 7e-2 At3g51710 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein S.X. H.G.
0.60 81.0 TaAffx.3444.1.S1_at BQ801852 - - 2e-6 At1g02080 transcriptional regulator-related S.X. H.G.
0.39 56.1 Ta.5661.1.S1_at BQ802737 - - 1e-16 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein S.X. H.G.
0.36 51.9 Ta.30926.1.S1_at CD895641 - - 1e-6 At1g50410 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein S.X. H.G.
0.34 48.1 TaAffx.39452.2.S1_at CA743638 - - 2e+0 At1g04985 unknown protein S.X. H.G.
0.34 48.1 Ta.23802.1.A1_at BJ286829 - - 4e-4 At5g07100 WRKY26 S.X. H.G.
0.32 44.4 Ta.20742.1.S1_at CD868348 - - 8e-54 At4g03080 kelch repeat-containing serine/threonine phosphoesterase family protein S.X. H.G.
0.32 44.4 Ta.10211.2.S1_at BJ243761 - - 3e-1 At5g15830 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) S.X. H.G.
0.29 39.2 Ta.9387.1.S1_at BJ251341 - - 9e-23 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) S.X. H.G.
0.27 35.6 Ta.7416.1.A1_at BJ265665 - - 2e+0 At5g63530 ATFP3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 96.6 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0 96.3 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7 95.8 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4 95.2 GSM314273 tissue type: floral bracts, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
3.1 94.5 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
3.0 94.3 GSM111251 genotype A35 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9 94.0 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9 94.0 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
2.7 93.3 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
2.6 92.9 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 TaAffx.58912.1.S1_at CA612650 - - 6e-5 At5g54110 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED) C.G. S.X.
0.03 4e+0 32 TaAffx.78514.1.S1_at CA731482 - - 3e-1 At1g18380 - C.G. S.X.
0.03 4e+0 32 TaAffx.66086.1.S1_at BJ208413 - - 3e-1 At3g29033 glycine-rich protein C.G. S.X.
0.03 4e+0 32 TaAffx.15830.2.S1_at BJ283307 - - 7e-2 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.03 2e+1 30 TaAffx.84554.1.S1_at CA634403 - - 1e-2 At3g59890 dihydrodipicolinate reductase family protein C.G. S.X.
0.04 2e+1 30 TaAffx.81333.1.S1_at CA687408 - - 8e+0 At4g23400 PIP1 C.G. S.X.
0.03 2e+1 30 TaAffx.59961.1.S1_at CA593068 - - 8e-1 At1g18440 peptidyl-tRNA hydrolase family protein C.G. S.X.
0.03 2e+1 30 TaAffx.57178.1.S1_at CA635006 - - 4e+0 At1g32000 - C.G. S.X.
0.05 2e+1 30 TaAffx.54766.1.S1_at CA677300 - - 7e+0 At5g23840 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-2 38 Arabidopsis thaliana At3g51710 824334 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein F:sugar binding;P:biological_process unknown;C:endomembrane system;PB - - - C.G. S.X.
0.03 2e+0 34 Glycine max Gma.17096.1.A1_at AI988143 - - 4e-6 At1g53800 endonuclease C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HK06B02r_s_at HK06B02r - - 1e-5 At3g43810 CAM7 (CALMODULIN 7) C.G. S.X.
0.06 2e-10 67 Oryza sativa Os06g0166100 AK066174.1 - FAR1 domain containing protein 7e-3 At5g04510 PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1) C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.217015.1.S1_x_at pmrna32114 hypothetical protein - 3e+0 At5g08535 D111/G-patch domain-containing protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1620067_at CB001941 - - 1e+1 At5g64530 XND1 C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.1394.1.S1_at 40794996-69 - - 2e-1 At5g46013 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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