Gene omics information

Query gene ID TaAffx.58659.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.58659.1.S1_atCA617521--2e+0At3g46000ADF2 (ACTIN DEPOLYMERIZING FACTOR 2)S.X.H.G.
0.045.8TaAffx.51434.1.S1_atCA725005--1e+1At5g28919-S.X.H.G.
0.023.6Ta.3598.2.S1_x_atCA611880--4e+0At4g36900RAP2.10 (related to AP2 10)S.X.H.G.
0.012.4TaAffx.38158.4.S1_x_atCA630021--1e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.012.4Ta.3836.1.S1_atBJ254410--2e+0At3g24460TMS membrane family protein / tumour differentially expressed (TDE) family proteinS.X.H.G.
0.012.4TaAffx.84143.1.S1_atCA714749--2e+1At4g05070unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.499.3GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.899.2GSM138167genotype G30 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.599.2GSM143491Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.799.1GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.199.0GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
7.598.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.298.5GSM138165genotype D15 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.298.1GSM246398SB3_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
5.897.9GSM111234genotype F44 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.697.8GSM138175genotype A81 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-1169Ta.9654.1.S1_atCD454382--5e-28At1g30470SIT4 phosphatase-associated family proteinC.G.S.X.
0.056e-134TaAffx.25642.1.S1_atCA697491--4e+0At5g65660hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.026e-134Ta.11260.1.S1_atBQ169723--2e-16At1g65410ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11)C.G.S.X.
0.042e+032TaAffx.85590.1.S1_atCA621315--4e+0At5g19490DNA binding / sequence-specific DNA bindingC.G.S.X.
0.042e+032TaAffx.12454.1.A1_atBJ261984--3e-1At1g53580GLY3 (GLYOXALASE II 3)C.G.S.X.
0.052e+032TaAffx.12454.2.S1_atCA614965--4e+0At1g68070zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.052e+032TaAffx.12454.2.S1_s_atCA614965--4e+0At1g68070zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.049e+030TaAffx.119493.1.S1_atBJ270447--4e+0At4g32330-C.G.S.X.
0.049e+030Ta.7995.2.S1_atBJ209923--9e-1At2g41760unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+032Arabidopsis thalianaAt3g46000823743ADF2 (ACTIN DEPOLYMERIZING FACTOR 2)Encodes depolymerizing factor 2.---C.G.S.X.
0.058e-134Glycine maxHgAffx.1945.1.A1_atCK351851--8e-1At4g01410harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.081e-1271Hordeum vulgareContig5538_atContig5538--1e-24At1g30470SIT4 phosphatase-associated family proteinC.G.S.X.
0.064e+032Oryza sativaOsAffx.30401.1.A1_at---0C.G.S.X.
0.083e+032Populus trichocarpaPtpAffx.218854.1.S1_s_atpmrna34594amino acid permease /// amino acid permease-5e+0At5g53940yippee family proteinC.G.S.X.
0.063e+030Vitis vinifera1606916_atCF202248.1--1e-1At3g10640VPS60.1C.G.S.X.
0.369e-143504Zea maysZm.4753.1.S1_atCF636516--3e-3At1g07990SIT4 phosphatase-associated family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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