CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.58132.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 TaAffx.58132.1.S1_at CA622200 - - 1e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
0.06 7.6 TaAffx.119321.1.S1_at BJ277147 - - 1e+0 At2g22420 peroxidase 17 (PER17) (P17) S.X. H.G.
0.03 4.7 TaAffx.78717.1.S1_at CA728365 - - 3e+0 At2g24570 WRKY17 S.X. H.G.
0.03 4.7 TaAffx.112158.1.S1_x_at CA626538 - - 2e+1 At3g28590 unknown protein S.X. H.G.
0.02 3.6 TaAffx.110731.1.S1_at CA655161 - - 2e+1 At5g55570 unknown protein S.X. H.G.
0.01 2.4 TaAffx.51673.1.S1_at CA720663 - - 2e-1 At2g37600 60S ribosomal protein L36 (RPL36A) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
25.7 99.8 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
20.5 99.7 GSM298056 Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
19.4 99.7 GSM250907 Tc_7dpi_mock_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.2 99.5 GSM139931 Anther maturea nthers rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.5 99.5 GSM111229 genotype B65 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
11.4 99.3 GSM343685 Wheat var. Kennedy_control_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.7 98.9 GSM143490 Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.4 98.9 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
8.3 98.8 GSM298062 Crown tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
7.5 98.6 GSM250887 TcLr34_3dpi_mock_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-3 42 TaAffx.113064.1.S1_at CA618411 - - 4e+0 At5g41400 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 2e-2 40 TaAffx.20799.1.A1_at CK211233 Fasciclin-like protein FLA4 - 9e+0 At5g65220 ribosomal protein L29 family protein C.G. S.X.
0.02 2e-2 40 Ta.1536.1.S1_at CD866069 - - 9e-4 At5g08160 ATPK3 C.G. S.X.
0.04 7e-2 38 TaAffx.52433.1.S1_at CA707884 - - 2e-1 At5g24316 proline-rich family protein C.G. S.X.
0.03 7e-2 38 TaAffx.28317.1.S1_at CA661906 - - 7e-5 At1g13300 myb family transcription factor C.G. S.X.
0.04 7e-2 38 TaAffx.26959.1.S1_at CA682886 - - 1e+0 At5g03030 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.05 7e-2 38 TaAffx.129577.2.S1_at BG314273 - - 1e+0 At3g52150 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.05 7e-2 38 TaAffx.129577.2.S1_x_at BG314273 - - 1e+0 At3g52150 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.05 7e-2 38 TaAffx.129577.2.S1_s_at BG314273 - - 1e+0 At3g52150 RNA recognition motif (RRM)-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At1g70895 843428 CLE17 (CLAVATA3/ESR-RELATED 17) Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. - - - C.G. S.X.
0.04 1e-1 38 Glycine max PsAffx.psZS006xJ17f_s_at PsAffx.psZS006xJ17f - - 2e-1 At5g19250 unknown protein C.G. S.X.
0.04 8e-3 40 Hordeum vulgare Contig13668_at Contig13668 - - 2e+0 At2g46820 PSI-P (PHOTOSYSTEM I P SUBUNIT) C.G. S.X.
0.26 4e-42 173 Oryza sativa Os05g0342000 9633.m02510 - Wound-induced WI12 family protein 2e-2 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.222023.1.S1_at pmrna39215 hypothetical protein - 1e+1 At5g66580 unknown protein C.G. S.X.
0.03 3e-1 34 Vitis vinifera 1611981_at CF403805 - - 6e-2 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein C.G. S.X.
0.05 3e-2 38 Zea mays ZmAffx.1018.1.S1_at AI881527 hypothetical protein LOC100279255 - 5e-2 At1g58420 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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