Gene omics information

Query gene ID	TaAffx.57652.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.57652.1.S1_at	CA626274	-	-	1e-9	At4g17310	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.14094.1.S1_at	BJ265070	-	-	2e-3	At1g17880	nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.11001.2.S1_a_at	CN008546	-	-	1e+0	At4g04090	speckle-type POZ protein-related	S.X.	H.G.	Please select
0.36	51.9	Ta.25449.1.S1_s_at	CD453603	-	-	4e-5	At5g05990	mitochondrial glycoprotein family protein / MAM33 family protein	S.X.	H.G.	Please select
0.07	8.6	Ta.1648.1.A1_a_at	CD453856	-	-	3e-11	At3g18190	chaperonin, putative	S.X.	H.G.	Please select
0.04	5.8	Ta.14369.1.S1_at	BJ295658	-	-	7e-99	At1g08360	60S ribosomal protein L10A (RPL10aA)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.7	99.4	GSM111208	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
12.6	99.4	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.9	99.4	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.2	99.3	GSM138155	genotype H5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.9	99.1	GSM111203	genotype A10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
8.7	98.9	GSM138198	genotype C22 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.7	98.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
8.2	98.8	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.8	98.7	GSM111223	genotype H5 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-5	50	Ta.17078.1.S1_at	CA617374	-	-	1e-2	At4g17310	unknown protein	C.G.	S.X.	Please select
0.07	1e-3	44	TaAffx.83906.1.S1_at	CA648589	-	-	1e+0	At3g03150	unknown protein	C.G.	S.X.	Please select
0.05	1e-3	44	TaAffx.40769.1.A1_at	BJ256252	-	-	4e+0	At4g21510	F-box family protein	C.G.	S.X.	Please select
0.06	1e-3	44	TaAffx.40769.2.A1_at	BE497900	-	-	2e-1	At5g41590	unknown protein	C.G.	S.X.	Please select
0.06	1e-3	44	TaAffx.40769.2.A1_x_at	BE497900	-	-	2e-1	At5g41590	unknown protein	C.G.	S.X.	Please select
0.04	1e-3	44	TaAffx.1833.1.S1_at	BJ239476	-	-	5e-1	At4g37409	unknown protein	C.G.	S.X.	Please select
0.05	1e-3	44	Ta.19300.1.S1_s_at	AJ610724	-	-	4e+0	At5g55570	unknown protein	C.G.	S.X.	Please select
0.05	1e-3	44	Ta.17083.1.S1_at	CA617395	-	-	1e-2	At3g14320	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	1e-3	44	Ta.17083.2.S1_at	CA626640	-	-	4e+0	At4g17310	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	1e-9	63	Arabidopsis thaliana	At4g17310	827444	unknown protein	F:unknown;P:unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	2e-8	59	Glycine max	GmaAffx.72561.2.S1_at	BG155858	-	-	2e-10	At4g17310	unknown protein	C.G.	S.X.	Please select
0.24	4e-26	117	Hordeum vulgare	Contig22648_at	Contig22648	-	-	6e-8	At4g17310	unknown protein	C.G.	S.X.	Please select
0.29	2e-49	196	Oryza sativa	OsAffx.24715.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	6e-6	52	Populus trichocarpa	PtpAffx.25638.1.S1_a_at	CV244998	hypothetical protein	-	4e-16	At4g17310	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1612884_at	CA810969	-	-	4e+0	At3g24513	-	C.G.	S.X.	Please select
0.32	2e-86	317	Zea mays	Zm.17347.1.S1_at	CK370714	hypothetical protein LOC100217009	-	1e-9	At4g17310	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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