Gene omics information

Query gene ID TaAffx.56155.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8393.4TaAffx.56155.1.S1_atCA656564--1e+1At5g26070hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.8393.4TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinS.X.H.G.
0.8092.2Ta.14146.3.S1_x_atCA697368--2e+1At5g24313unknown proteinS.X.H.G.
0.3956.1Ta.3203.2.S1_x_atCA621738--5e-6At1g27530-S.X.H.G.
0.3854.7TaAffx.30673.1.S1_atCA623010--7e-11At4g25630FIB2 (FIBRILLARIN 2)S.X.H.G.
0.1922.4TaAffx.112158.1.S1_atCA626538--2e+1At3g28590unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.399.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
9.899.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.298.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
6.598.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.596.9GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
3.996.1GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.294.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.893.6GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.793.3GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.793.3GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.392e-54212TaAffx.84444.1.S1_atCA636681--1e+1At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.432e-39163TaAffx.118596.1.S1_atCD910797--5e+0At4g39610unknown proteinC.G.S.X.
0.192e-35149Ta.14415.1.S1_atBJ31047820S proteasome beta 7 subunit-4e-3At1g56450PBG1C.G.S.X.
0.093e-756Ta.16137.3.S1_a_atCA744355--3e-1At3g05120GID1A (GA INSENSITIVE DWARF1A)C.G.S.X.
0.202e-550TaAffx.79024.1.S1_atCA723674--9e-1At5g36710unknown proteinC.G.S.X.
0.044e-342Ta.11529.1.S1_atBQ170285--7e+0At5g15060-C.G.S.X.
0.092e-240TaAffx.37879.1.S1_atBJ266156--5e+0At4g12960gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinC.G.S.X.
0.056e-238TaAffx.12960.1.S1_atBJ215741--6e+0At4g15510photosystem II reaction center PsbP family proteinC.G.S.X.
0.056e-238TaAffx.12960.1.S1_s_atBJ215741--6e+0At4g15510photosystem II reaction center PsbP family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+130Arabidopsis thalianaAt5g26070832676hydroxyproline-rich glycoprotein family proteinEncodes a protein with 23.5% proline residues and proline-rich extensin domains, INTERPRO:IPR002965; similar to root nodule extensin (Pisum sativum) gi:15021750/gb:AAK77902; Common family members: At5g19800, At5g57070, At1g72790 (Arabidopsis thaliana)---C.G.S.X.
0.031e+034Glycine maxHgAffx.19035.2.A1_atCB379214--4e+0At4g15650protein kinase-relatedC.G.S.X.
0.042e+032Hordeum vulgareEBpi01_SQ002_O15_atEBpi01_SQ002_O15--2e+0At5g47130Bax inhibitor-1 family / BI-1 familyC.G.S.X.
0.047e+032Oryza sativaOs02g02586019630.m01487--2e+0At4g28290unknown proteinC.G.S.X.
0.033e-136Populus trichocarpaPtp.610.1.S1_atCV227460hypothetical protein-1e-22At1g12310calmodulin, putativeC.G.S.X.
0.034e+030Vitis vinifera1607235_atCB340942hypothetical protein LOC100259188-7e-1At4g09620-C.G.S.X.
0.044e-134Zea maysZmAffx.530.2.A1_atAI668127hypothetical protein LOC100273219-3e+0At2g17972unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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