Gene omics information

Query gene ID TaAffx.56013.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.56013.1.S1_atCA658531--6e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.8393.4TaAffx.108219.1.S1_atCA690622--3e-1At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)S.X.H.G.
0.7790.8Ta.1977.2.A1_atBE231484--1e+0At3g07430emb1990 (embryo defective 1990)S.X.H.G.
0.6182.0TaAffx.39457.1.A1_atBG904975--2e+0Atmg00850-S.X.H.G.
0.6182.0TaAffx.26385.1.S1_x_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinS.X.H.G.
0.5072.4TaAffx.26385.1.S1_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.199.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
17.099.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.099.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.199.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.099.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.099.3GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
10.499.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.098.8GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
6.998.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.798.4GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.155e-26117Ta.27923.2.S1_x_atCK212552small subunit-3e-14At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.091e-859TaAffx.86598.1.S1_atCA604844--4e+0At3g10520AHB2 (ARABIDOPSIS HAEMOGLOBIN 2)C.G.S.X.
0.151e-859Ta.2752.3.S1_x_atBJ266715ribulosebisphosphate carboxylase small subunit-8e-12At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.174e-857TaAffx.108411.1.S1_atCA688629--3e+0At2g13150transcription factorC.G.S.X.
0.142e-756TaAffx.5485.1.S1_atCA709371--9e+0At5g07490unknown proteinC.G.S.X.
0.062e-756Ta.2752.2.S1_x_atBE216923--6e-13At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.114e-548TaAffx.108219.1.S1_atCA690622--3e-1At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.062e-446Ta.2752.1.A1_x_atCA680240ribulosebisphosphate carboxylase small subunit-7e-9At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.062e-446Ta.2752.1.S1_x_atBE213237ribulosebisphosphate carboxylase small subunit-7e-9At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-134Arabidopsis thalianaAt5g38410833828ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)F:ribulose-bisphosphate carboxylase activity;P:response to blue light, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 8 components;POB---C.G.S.X.
0.043e+032Glycine maxGma.11810.1.S1_atAW706115--3e+0At5g37720RNA and export factor-binding protein, putativeC.G.S.X.
0.181e-961Hordeum vulgareHO10O22S_atHO10O22S--3e-17At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.081e+034Oryza sativaOs12g0291100CB669997-Ribulose bisphosphate carboxylase, small chainfamily protein9e-6At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.033e+032Populus trichocarpaPtpAffx.18265.1.A1_atCV255241pseudo response regulator-6e-15At2g46670pseudo-response regulator, putative / timing of CAB expression 1-like protein, putativeC.G.S.X.
0.057e-132Vitis vinifera1613936_x_atCF568996--8e-24At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.095e-650Zea maysZm.6763.4.S1_atBG841872hypothetical protein LOC100279574-8e-6At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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