Gene omics information

Query gene ID TaAffx.55653.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5576.8TaAffx.55653.1.S1_atCA663094--1e+1At4g20030RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.8393.4TaAffx.4857.1.S1_atCA730111--4e+0At1g77682-S.X.H.G.
0.8092.2TaAffx.79437.1.S1_atCA715704--3e+0At1g02680TAF13 (TBP-ASSOCIATED FACTOR 13)S.X.H.G.
0.5576.8TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinS.X.H.G.
0.5072.4TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinS.X.H.G.
0.5072.4TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.699.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.599.3GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
11.299.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
11.199.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.499.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
10.399.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.199.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.598.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
6.898.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.697.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-240TaAffx.7235.1.S1_atCA664552--4e+0At5g07100WRKY26C.G.S.X.
0.042e-136TaAffx.87099.1.S1_atCA595796--4e+0At5g16700glycosyl hydrolase family 5 protein / cellulase family proteinC.G.S.X.
0.042e-136TaAffx.114051.1.S1_atBJ258146--6e+0At3g60370immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinC.G.S.X.
0.042e-136TaAffx.110390.1.S1_atCA659431--1e-3At1g44970peroxidase, putativeC.G.S.X.
0.042e-136TaAffx.107188.1.S1_atCA704687--4e+0At3g45500-C.G.S.X.
0.022e-136Ta.1930.1.S1_x_atCA700798--2e+0At5g19250unknown proteinC.G.S.X.
0.039e-134TaAffx.65278.1.S1_atBJ252994--4e-1At3g13130unknown proteinC.G.S.X.
0.039e-134TaAffx.123156.1.S1_atCA679382--1e+0At2g44745WRKY family transcription factorC.G.S.X.
0.029e-134Ta.8372.1.S1_atBQ161805--1e-1At4g17670senescence-associated protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+130Arabidopsis thalianaAt4g20030827748RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:nucleus;MPFOBA---C.G.S.X.
0.035e+032Glycine maxPsAffx.C17000016_atPsAffx.C17000016--6e+0At5g50260cysteine proteinase, putativeC.G.S.X.
0.053e-238Hordeum vulgareHVSMEi0007L20r2_x_atHVSMEi0007L20r2--7e-1At1g50800unknown proteinC.G.S.X.
0.051e-138Oryza sativaOs.46710.4.S1_at---0C.G.S.X.
0.055e+032Populus trichocarpaPtpAffx.215847.1.S1_atpmrna30264hypothetical protein-3e-1At5g20100unknown proteinC.G.S.X.
0.034e+030Vitis vinifera1622578_atCA812344--1e-3At5g42300UBL5 (UBIQUITIN-LIKE PROTEIN 5)C.G.S.X.
0.044e-134Zea maysZm.6532.1.A1_atU09276.1abscisic stress protein homolog-1e-1At1g62060unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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