Gene omics information

Query gene ID TaAffx.55497.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5678.6TaAffx.55497.1.S1_atCA665286--3e-1At5g62610basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.5678.6TaAffx.59475.1.S1_atCA599957--3e-1At4g2589060S acidic ribosomal protein P3 (RPP3A)S.X.H.G.
0.5576.8TaAffx.105981.1.S1_atCA727065--3e-1At4g11870unknown proteinS.X.H.G.
0.4869.0TaAffx.112556.1.S1_atCA622998--4e+0At1g67760ATP binding / protein binding / unfolded protein bindingS.X.H.G.
0.4869.0TaAffx.135182.1.S1_x_atCA673772--2e+1At5g23640unknown proteinS.X.H.G.
0.4260.9Ta.16453.1.S1_atCA606648--1e+0At4g29650cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolaseS.X.H.G.
0.4260.9TaAffx.64914.1.S1_atBJ270115--4e+0At1g51915cryptdin protein-relatedS.X.H.G.
0.3549.8Ta.19591.2.A1_a_atCA651113--4e+0At5g11500unknown proteinS.X.H.G.
0.3346.9TaAffx.120617.1.S1_atBJ212756--4e+0At2g39470PPL2 (PsbP-like protein 2)S.X.H.G.
0.2735.6TaAffx.51911.1.S1_atCA716547--3e+0At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.999.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
20.499.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
15.899.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
10.299.2GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
7.898.7GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.897.9GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.597.8GSM111179genotype DH95 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
4.196.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.196.4GSM298054Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.996.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.339e-1787Ta.24407.1.S1_atCA630579--4e+0At5g6117040S ribosomal protein S19 (RPS19C)C.G.S.X.
0.228e-1477Ta.7921.1.S1_atBJ247928--5e+0At5g6117040S ribosomal protein S19 (RPS19C)C.G.S.X.
0.282e-1169Ta.30886.1.S1_atCN011416--4e+0At5g46840RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.233e-446TaAffx.64370.1.S1_atBJ302440--4e+0At2g46160zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.111e-344TaAffx.110445.1.S1_atCA658813--1e+0At5g55110stigma-specific Stig1 family proteinC.G.S.X.
0.042e-240TaAffx.37337.1.A1_atBJ284867--5e+0At4g19270unknown proteinC.G.S.X.
0.047e-238Ta.17938.1.S1_atCA626169--1e+0At5g12030AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)C.G.S.X.
0.043e-136TaAffx.78618.1.S1_atCA730007--1e+0At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.041e+034TaAffx.111903.1.S1_atCA630778--8e-1At2g28440proline-rich family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt5g62610836382basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast;PFM---C.G.S.X.
0.032e+034Glycine maxPsAffx.CL948Contig1_atPsAffx.CL948Contig1--4e+0At1g11650RNA-binding protein 45 (RBP45), putativeC.G.S.X.
0.035e-134Hordeum vulgareContig20346_atContig20346--8e-2At3g60590unknown proteinC.G.S.X.
0.042e+034Oryza sativaOsAffx.13754.1.S1_at---0C.G.S.X.
0.031e-138Populus trichocarpaPtp.5132.1.S1_atCV235525hypothetical protein-2e+0At3g15800glycosyl hydrolase family 17 proteinC.G.S.X.
0.035e+030Vitis vinifera1609576_atBQ794740hypothetical protein LOC100254953-4e+0At5g57400unknown proteinC.G.S.X.
0.037e+030Zea maysZmAffx.815.1.A1_atAI770430Hypothetical protein LOC100191164-3e+0At4g27320universal stress protein (USP) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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