Gene omics information

Query gene ID TaAffx.54499.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.54499.1.S1_atCA680741--3e+0At3g24570peroxisomal membrane 22 kDa family proteinS.X.H.G.
0.3142.7TaAffx.78272.1.S1_atCA735024--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeS.X.H.G.
0.2125.5Ta.9542.3.S1_x_atCA640676--4e-3At5g01810CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)S.X.H.G.
0.034.7TaAffx.26470.1.S1_atCA688638--4e+0At4g21610LOL2 (LSD ONE LIKE 2)S.X.H.G.
0.034.7TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinS.X.H.G.
0.012.4TaAffx.61855.2.S1_atCA614570--4e+0At3g44150unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.399.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.399.2GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.799.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.598.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.798.4GSM111203genotype A10 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.497.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.197.5GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.097.4GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.997.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.897.2GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.442e-22105TaAffx.54410.1.S1_atCA681971--4e+0At3g55490-C.G.S.X.
0.091e-240TaAffx.57809.1.S1_atCA624902--4e+0At2g17180zinc finger (C2H2 type) family proteinC.G.S.X.
0.015e-238Ta.2593.2.S1_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.015e-238Ta.2593.2.S1_x_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.043e+032TaAffx.78987.1.S1_atCA723983--4e+0At5g15220ribosomal protein L27 family proteinC.G.S.X.
0.023e+032TaAffx.122595.1.S1_atCA732768--4e-42At3g11910UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13)C.G.S.X.
0.031e+130TaAffx.92684.1.A1_atBJ252785--1e+0At3g53220thioredoxin family proteinC.G.S.X.
0.031e+130TaAffx.9233.1.S1_atCA606815--1e+0At1g26799-C.G.S.X.
0.031e+130TaAffx.85103.1.S1_atCA625562--4e+0At4g36170unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt3g24570822053peroxisomal membrane 22 kDa family proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, integral to membrane, peroxisomal membrane;MFPO---C.G.S.X.
0.041e+034Glycine maxGmaAffx.70400.1.S1_atCA936795--9e-1At2g19590ACO1 (ACC OXIDASE 1)C.G.S.X.
0.045e+030Hordeum vulgareHVSMEl0002M03r2_atHVSMEl0002M03r2--4e+1At5g55630ATKCO1C.G.S.X.
0.035e+032Oryza sativaOs09g03828009637.m01851--3e-4At4g19710bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putativeC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.219264.1.S1_atpmrna35131hypothetical protein-2e-1At1g01305unknown proteinC.G.S.X.
0.033e+030Vitis vinifera1621170_atCB004090hypothetical protein LOC100255274-2e-2At3g04760pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.031e+032Zea maysZm.13777.1.A1_atCK347797--8e-8At1g27435unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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