Gene omics information

Query gene ID TaAffx.54376.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8994.6TaAffx.54376.1.S1_atCA682436--4e+0At4g26960unknown proteinS.X.H.G.
0.6986.9TaAffx.53143.1.S1_atCA696095--1e+1At4g20440smB (small nuclear ribonucleoprotein associated protein B)S.X.H.G.
0.4260.9TaAffx.128414.46.S1_atBE216982--5e-87Atcg00490-S.X.H.G.
0.4260.9TaAffx.121220.2.S1_atCA677165Harpin binding protein 1-4e+0At5g50030invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.4159.6TaAffx.81144.2.S1_atCA689155--4e+0At5g51120PABN1 (POLYADENYLATE-BINDING PROTEIN 1)S.X.H.G.
0.4159.6TaAffx.82941.1.S1_atCA664642--2e-8At5g51660CPSF160S.X.H.G.
0.3956.1TaAffx.106042.1.S1_atCA725497--4e+0At3g18773zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.3956.1TaAffx.108170.4.S1_atCA689645--2e+1At3g17609HYH (HY5-HOMOLOG)S.X.H.G.
0.3854.7TaAffx.59680.1.S1_atCA733434--1e+0At5g48920TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)S.X.H.G.
0.3854.7TaAffx.106154.2.S1_atCA725477--4e+0At4g30980basic helix-loop-helix (bHLH) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
56.199.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
42.599.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
35.699.9GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
19.499.7GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
18.799.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
17.199.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
15.899.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.798.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.198.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.098.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.141e-1273TaAffx.116549.1.S1_atCA677622acyl transferase 3-like-5e+0At5g10700aminoacyl-tRNA hydrolase/ protein tyrosine phosphataseC.G.S.X.
0.063e-446TaAffx.83319.1.S1_atCA658803--2e+1At1g13600AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58)C.G.S.X.
0.011e+034Ta.5140.1.S1_atBT009611.1Multiple inositol polyphosphate phosphatase PhyIIa2-2e-4At1g09870histidine acid phosphatase family proteinC.G.S.X.
0.021e+034Ta.27506.1.S1_atAY428038.1ammonium transporter AMT2.1-3e-3At2g38290ATAMT2 (AMMONIUM TRANSPORTER 2)C.G.S.X.
0.034e+032TaAffx.25591.1.S1_atCA698030--1e+0At4g01100ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1)C.G.S.X.
0.034e+032Ta.5969.1.A1_atCK213315--2e-2At1g02710glycine-rich proteinC.G.S.X.
0.024e+032Ta.5428.1.S1_atBU100019Acyl transferase 3-like-2e+0At2g44578protein binding / zinc ion bindingC.G.S.X.
0.014e+032Ta.30795.1.S1_atBG905417--6e-139At4g33010AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)C.G.S.X.
0.024e+032Ta.28864.1.S1_atAF139816.1plasma membrane intrinsic protein 3-6e-20At2g45960PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt4g26960828803unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.044e-136Glycine maxGmaAffx.72443.1.S1_atBG041485--8e-1At1g343805'-3' exonuclease family proteinC.G.S.X.
0.362e-34145Hordeum vulgareContig10144_s_atContig10144--1e-13At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.043e-240Oryza sativaOs04g0644600AK099966.1-Epoxide hydrolase family protein4e-21At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.15649.2.S1_s_atCV257010--3e+0At5g51790basix helix-loop-helix (bHLH) family proteinC.G.S.X.
0.038e-236Vitis vinifera1610793_atCD008344--6e-6At4g18840pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.042e+032Zea maysZmAffx.933.1.S1_atAI795521--3e+0At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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