Gene omics information

Query gene ID TaAffx.53644.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5072.4TaAffx.53644.1.S1_atCA690428--7e-1At5g52220-S.X.H.G.
0.4362.2TaAffx.53146.1.S1_atCA696077--3e-1At3g17890unknown proteinS.X.H.G.
0.1618.2TaAffx.48792.1.S1_atCA657622--4e+0At5g16550unknown proteinS.X.H.G.
0.1213.3Ta.16475.1.S1_atCA606935--4e+0At2g29840protein binding / zinc ion bindingS.X.H.G.
0.1011.3TaAffx.110250.4.S1_atCA681765--1e+0At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinS.X.H.G.
0.0910.4Ta.12483.1.A1_atBQ172442--2e+1At5g63150unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.299.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
15.099.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.399.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
10.199.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.999.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.698.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
7.598.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.498.6GSM143504Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.998.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.798.4GSM250916TcLr1_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.115e-1167TaAffx.80217.2.S1_atCA682449--4e+0At4g35070-C.G.S.X.
0.081e-859Ta.1459.1.S1_atCD884489--7e+0At2g17880DNAJ heat shock protein, putativeC.G.S.X.
0.042e-136TaAffx.120114.1.S1_atBJ243768--3e-1At1g23290RPL27ABC.G.S.X.
0.033e+032TaAffx.82050.1.S1_atCA678393--4e+0At5g41350zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.033e+032TaAffx.12708.2.S1_atBJ242787--1e+0At5g50090unknown proteinC.G.S.X.
0.023e+032Ta.5301.1.S1_atBJ280396--7e-3At4g19690IRT1 (iron-regulated transporter 1)C.G.S.X.
0.013e+032Ta.28852.1.S1_atAY376128.1ETTIN-like auxin response factor-8e-14At2g33860ETT (ETTIN)C.G.S.X.
0.023e+032Ta.25587.1.S1_atCA728814--5e-1At5g52220-C.G.S.X.
0.023e+032Ta.25255.1.S1_s_atBJ296167--2e+0At1g80130bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.057e-134Arabidopsis thalianaAt5g52220835298-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO---C.G.S.X.
0.044e+032Glycine maxPsAffx.psZO003iC05r_s_atPsAffx.psZO003iC05r--3e-1At5g14440-C.G.S.X.
0.131e-1375Hordeum vulgareContig7255_atContig7255--6e+0At3g26147unknown proteinC.G.S.X.
0.031e+034Oryza sativaOs05g0593200AK059115.1-Hypothetical protein4e-1At5g46730glycine-rich proteinC.G.S.X.
0.056e-238Populus trichocarpaPtpAffx.220838.1.S1_s_atpmrna37284hypothetical protein-6e-2At5g55508unknown proteinC.G.S.X.
0.048e-132Vitis vinifera1615370_atCF372878hypothetical protein LOC100266022-6e-2At4g08330unknown proteinC.G.S.X.
0.055e+030Zea maysZmAffx.912.1.A1_atAI770956--5e-2At4g01580transcriptional factor B3 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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