CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.5364.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 TaAffx.5364.1.S1_at CA713366 - - 9e-1 At5g43935 FLS6 (FLAVONOL SYNTHASE 6) S.X. H.G.
0.25 32.1 TaAffx.29077.1.S1_at CA650817 - - 1e+1 At5g51795 Kin17 DNA-binding protein-related S.X. H.G.
0.05 6.7 TaAffx.112085.1.S1_at CA627212 - - 4e+0 At4g15710 unknown protein S.X. H.G.
0.02 3.6 TaAffx.78428.1.S1_at CA732797 - - 1e+0 At4g15610 integral membrane family protein S.X. H.G.
0.01 2.4 TaAffx.50694.1.S1_at CA736877 - - 2e+0 At3g07590 small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative S.X. H.G.
0.01 2.4 Ta.22060.1.A1_at BG906078 - - 2e-1 At2g20690 lumazine-binding family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.6 99.9 GSM298068 Leaf tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
35.0 99.9 GSM111233 genotype H8 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
21.8 99.8 GSM111175 genotype G30 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
21.4 99.7 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
16.1 99.6 GSM250918 TcLr34_7dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.9 99.4 GSM111223 genotype H5 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
11.4 99.3 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
11.4 99.3 GSM250909 TcLr1_7dpi_mock_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.7 99.2 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
10.0 99.1 GSM111197 genotype J15 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-2 38 TaAffx.8885.1.S1_at CA618589 - - 7e-8 At5g40150 peroxidase, putative C.G. S.X.
0.03 6e-2 38 Ta.1569.1.S1_at CD452418 - - 2e+0 At3g19460 reticulon family protein (RTNLB11) C.G. S.X.
0.06 6e-2 38 Ta.1569.2.S1_a_at CA601989 - - 2e+0 At2g03170 ASK14 (ARABIDOPSIS SKP1-LIKE 14) C.G. S.X.
0.06 6e-2 38 Ta.1569.2.S1_x_at CA601989 - - 2e+0 At2g03170 ASK14 (ARABIDOPSIS SKP1-LIKE 14) C.G. S.X.
0.04 2e-1 36 TaAffx.88779.2.S1_at CA710282 - - 3e+0 At2g22805 - C.G. S.X.
0.02 9e-1 34 TaAffx.92758.1.S1_at BJ251676 Endo-beta-1,3-glucanase - 7e-1 At2g35210 RPA (ROOT AND POLLEN ARFGAP) C.G. S.X.
0.06 9e-1 34 TaAffx.8683.1.S1_at CA621660 - - 9e-1 At4g15460 glycine-rich protein C.G. S.X.
0.04 9e-1 34 TaAffx.86046.1.S1_at CA617267 - - 5e-9 At5g02040 PRA1.A1 (PRENYLATED RAB ACCEPTOR 1.A1) C.G. S.X.
0.03 9e-1 34 TaAffx.24480.1.S1_at CA718867 - - 4e+0 At1g64470 ubiquitin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-1 34 Arabidopsis thaliana At5g43935 834416 FLS6 (FLAVONOL SYNTHASE 6) F:flavonol synthase activity, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM - - - C.G. S.X.
0.03 1e+0 34 Glycine max PsAffx.C38000073_at PsAffx.C38000073 - - 3e+1 At5g16530 PIN5 (PIN-FORMED 5) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig8521_s_at Contig8521 - - 4e+0 At5g05987 PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2) C.G. S.X.
0.05 1e-1 38 Oryza sativa Os03g0127000 AK068479.1 - Conserved hypothetical protein 7e-1 At1g32880 importin alpha-1 subunit, putative C.G. S.X.
0.03 1e+0 34 Populus trichocarpa PtpAffx.4020.2.S1_s_at CX659915 hypothetical protein - 9e-39 At1g31780 - C.G. S.X.
0.03 2e+1 28 Vitis vinifera 1619399_s_at CB914618 - - 1e-1 At2g30560 glycine-rich protein C.G. S.X.
0.04 4e-1 34 Zea mays Zm.11631.1.A1_at BM379442 brittle stalk2 - 1e+0 At4g15460 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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