CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.5323.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 92.2 TaAffx.5323.1.S1_at BJ319065 - - 4e-6 At4g32600 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.38 54.7 Ta.1323.1.S1_at CK201629 - - 5e-4 At5g10330 HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1) S.X. H.G.
0.36 51.9 TaAffx.128927.1.A1_at CK207679 - - 3e-2 At4g03020 transducin family protein / WD-40 repeat family protein S.X. H.G.
0.33 46.9 Ta.2593.2.S1_at BQ169061 - - 1e-25 At5g62000 ARF2 (AUXIN RESPONSE FACTOR 2) S.X. H.G.
0.30 40.9 Ta.8098.2.S1_at CA656870 - - 6e+0 At3g14200 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.18 21.0 Ta.523.1.S1_at BE604675 - - 2e-5 At2g30880 pleckstrin homology (PH) domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 97.3 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
3.8 96.0 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7 95.8 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
3.7 95.8 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
3.5 95.4 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0 94.3 GSM250888 TcLr34_3dpi_inoculated_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8 93.6 GSM314286 tissue type: 22 DAP embryo - rep3 GSE12508 Transcription patterns during wheat development
2.6 92.9 GSM324493 Si+ B+ rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.5 92.5 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4 92.0 GSM143506 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 1e-43 178 TaAffx.28579.1.S1_x_at CA658608 - - 2e+1 At4g15910 ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) C.G. S.X.
0.21 1e-43 178 TaAffx.28579.1.S1_at CA658608 - - 2e+1 At4g15910 ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) C.G. S.X.
0.19 1e-30 135 Ta.7233.1.A1_a_at CD454219 - - 4e-5 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.17 7e-17 89 Ta.9487.1.S1_at CD935778 - - 2e-10 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 6e-2 40 Ta.7233.3.S1_at BE498466 - - 5e+0 At5g42905 nucleic acid binding / ribonuclease H C.G. S.X.
0.02 2e-1 38 TaAffx.19331.1.S1_at CA599678 - - 3e-1 At2g45010 unknown protein C.G. S.X.
0.01 1e+0 36 TaAffx.24919.1.S1_at BJ293166 - - 1e-3 At2g30590 WRKY21 C.G. S.X.
0.01 1e+0 36 TaAffx.117971.1.S1_s_at CA730429 - - 8e+0 At4g22890 PGR5-LIKE A C.G. S.X.
0.01 1e+0 36 Ta.730.1.S1_at BJ287118 - - 4e-2 At1g35680 50S ribosomal protein L21, chloroplast / CL21 (RPL21) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 4e-6 54 Arabidopsis thaliana At4g32600 829395 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:plasma membrane;PMOFVB - - - C.G. S.X.
0.01 1e+0 36 Glycine max GmaAffx.87944.1.S1_at BU090734 - - 1e-9 At5g66380 ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1) C.G. S.X.
0.50 0 1148 Hordeum vulgare Contig17951_at Contig17951 - - 3e-8 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.46 2e-133 478 Oryza sativa Os05g0179000 AK071804.1 - Zn-finger, RING domain containing protein 7e-20 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.07 1e-9 65 Populus trichocarpa PtpAffx.22660.1.A1_at DN497179 hypothetical protein - 3e-46 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 7e-2 38 Vitis vinifera 1620739_s_at BQ800573 hypothetical protein LOC100245718 - 2e-8 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.19 2e-18 93 Zea mays Zm.5393.1.S1_at CF056132 - - 2e-26 At1g80400 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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