Gene omics information

Query gene ID TaAffx.52559.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4869.0TaAffx.52559.1.S1_atCA705493--2e+0At2g18660EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)S.X.H.G.
0.3549.8TaAffx.106563.2.S1_atCA690184--1e+1At4g19100unknown proteinS.X.H.G.
0.3346.9TaAffx.628.1.A1_x_atBQ168608--4e+0At5g15290integral membrane family proteinS.X.H.G.
0.2532.1Ta.28090.2.S1_atCA599290--3e-1At5g11080ubiquitin family proteinS.X.H.G.
0.2329.0TaAffx.80681.1.S1_atCA694032--3e+0At3g03160unknown proteinS.X.H.G.
0.2329.0Ta.5770.2.S1_x_atCA670183--4e+0At2g44578protein binding / zinc ion bindingS.X.H.G.
0.1821.0TaAffx.72471.1.S1_atCA725188--1e+0At2g27940zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.056.7TaAffx.15855.1.S1_atBQ802932--6e+0At3g43430zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
75.7100.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
11.599.3GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
10.199.2GSM298065Leaf tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
9.999.1GSM111210genotype B11 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
8.098.8GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat development
7.098.5GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
6.398.2GSM138201genotype F48 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.897.9GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.797.9GSM111203genotype A10 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.697.8GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.271e-1789Ta.24208.2.S1_atBJ243606--7e+0At5g27541C.G.S.X.
0.025e-134Ta.8027.1.S1_x_atBQ171553--3e+0At3g48360BT2 (BTB AND TAZ DOMAIN PROTEIN 2)C.G.S.X.
0.025e-134Ta.8027.1.S1_atBQ171553--3e+0At3g48360BT2 (BTB AND TAZ DOMAIN PROTEIN 2)C.G.S.X.
0.042e+032TaAffx.83971.1.S1_atCA647091--1e+0At3g10350anion-transporting ATPase family proteinC.G.S.X.
0.048e+030TaAffx.99284.1.A1_atCK208146--8e-2At2g36590ProT3 (PROLINE TRANSPORTER 3)C.G.S.X.
0.048e+030TaAffx.83441.1.S1_atCA657526--2e+1At5g19070-C.G.S.X.
0.058e+030TaAffx.8234.1.S1_atCA630643--3e+0At5g38220hydrolaseC.G.S.X.
0.028e+030TaAffx.71613.1.S1_atCK215646--7e-4At4g16780ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)C.G.S.X.
0.108e+030TaAffx.64385.1.S1_atBJ307645--3e-5At5g54460wound-responsive protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e+032Arabidopsis thalianaAt2g18660816381EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.---C.G.S.X.
0.053e+032Glycine maxGmaAffx.546.1.S1_atBE330030--6e-48At5g47860unknown proteinC.G.S.X.
0.044e+030Hordeum vulgareHV_CEb0010P08r2_atHV_CEb0010P08r2--3e+0At3g46230ATHSP17.4C.G.S.X.
0.053e-136Oryza sativaOsAffx.29870.1.S1_at---0C.G.S.X.
0.061e+130Populus trichocarpaPtpAffx.849.3.A1_a_atCA822022hypothetical protein-4e-26At3g2339060S ribosomal protein L36a/L44 (RPL36aA)C.G.S.X.
0.059e+028Vitis vinifera1621795_atCF512255--5e-1At2g32650-C.G.S.X.
0.079e-132Zea maysZm.1389.2.S1_atAI737173--2e+0At1g18720unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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