Gene omics information

Query gene ID TaAffx.52087.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9899.9TaAffx.52087.1.S1_atCA713424--6e-2At3g04770RPSAb (40S ribosomal protein SA B)S.X.H.G.
0.4362.2TaAffx.9418.1.S1_atCA599433--4e+0At5g55680glycine-rich proteinS.X.H.G.
0.4058.4TaAffx.65420.1.S1_atBJ247128--4e+0At2g23540GDSL-motif lipase/hydrolase family proteinS.X.H.G.
0.4058.4TaAffx.58303.1.S1_atCA620762--4e+0At3g61050NTMC2T4S.X.H.G.
0.3753.0Ta.17659.1.S1_x_atCA605465--1e-9At5g56150UBC30 (ubiquitin-conjugating enzyme 30)S.X.H.G.
0.3549.8TaAffx.113024.3.S1_atCA618057--3e-1At5g26700germin-like protein, putativeS.X.H.G.
0.3448.1TaAffx.27409.1.S1_atCA677175--4e+0At1g02405proline-rich family proteinS.X.H.G.
0.3448.1TaAffx.108544.2.S1_x_atCA687168--3e+0At5g14730unknown proteinS.X.H.G.
0.3142.7TaAffx.112068.1.S1_atCA627320--4e-9At3g16240DELTA-TIPS.X.H.G.
0.3142.7TaAffx.30435.1.S1_atCA625345--9e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.499.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
15.599.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
14.899.5GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
14.699.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.599.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.699.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.099.4GSM250918TcLr34_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.999.3GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.798.9GSM298066Leaf tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.698.9GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-344TaAffx.85930.1.S1_atCA618360--8e-1At3g04770RPSAb (40S ribosomal protein SA B)C.G.S.X.
0.042e-136Ta.30733.3.S1_atCA683412--4e-3At1g77710-C.G.S.X.
0.032e-136Ta.12789.2.A1_x_atCK211356--5e-9At1g77710-C.G.S.X.
0.039e-134Ta.3186.1.A1_atCK211502--5e-3At3g10150PAP16 (PURPLE ACID PHOSPHATASE 16)C.G.S.X.
0.049e-134Ta.30733.2.S1_x_atCA696784--4e+0At1g77710-C.G.S.X.
0.049e-134Ta.30733.2.S1_atCA696784--4e+0At1g77710-C.G.S.X.
0.039e-134Ta.30733.1.S1_x_atCA699047--6e-9At1g77710-C.G.S.X.
0.039e-134Ta.29363.1.S1_atBJ263473--2e-6At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.039e-134Ta.29424.1.A1_a_atCK205869--3e-1At4g02610tryptophan synthase, alpha subunit, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-238Arabidopsis thalianaAt3g04770819637RPSAb (40S ribosomal protein SA B)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane;BMOAFP---C.G.S.X.
0.048e-548Glycine maxHgAffx.8887.1.S1_atCB824415--4e-1At5g04047-C.G.S.X.
0.044e-134Hordeum vulgareContig20987_atContig20987--1e-3At4g02610tryptophan synthase, alpha subunit, putativeC.G.S.X.
0.042e-344Oryza sativaOs.55584.1.S1_at---0C.G.S.X.
0.055e+032Populus trichocarpaPtpAffx.212764.1.S1_atpmrna24971--2e+0At4g22220ISU1C.G.S.X.
0.031e+032Vitis vinifera1621771_atCB34852240S ribosomal protein SA-1e-110At1g72370P40C.G.S.X.
0.042e+032Zea maysZm.16537.2.A1_atCD437670--2e-35At3g04770RPSAb (40S ribosomal protein SA B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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