Gene omics information

Query gene ID TaAffx.51594.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)S.X.H.G.
0.6786.3Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinS.X.H.G.
0.6182.0TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinS.X.H.G.
0.6182.0Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)S.X.H.G.
0.6081.0Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)S.X.H.G.
0.4260.9TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.999.7GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
18.599.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
18.499.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.399.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.399.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.399.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.299.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
6.498.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
6.398.2GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
5.097.4GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-342TaAffx.73210.1.S1_atCF182126--2e-2At3g26742unknown proteinC.G.S.X.
0.044e-342TaAffx.51646.1.S1_atCA721178--1e+1At5g23070thymidine kinase, putativeC.G.S.X.
0.042e-240TaAffx.93376.1.S1_x_atBJ213475--2e-2At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
0.042e-240TaAffx.93376.1.S1_atBJ213475--2e-2At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
0.042e-240TaAffx.106029.1.S1_atCA662610--3e-1At4g22550phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.022e-240Ta.29361.1.S1_atBQ805895--3e-1At1g20790F-box family proteinC.G.S.X.
0.042e-240Ta.28085.2.S1_x_atCA598216--7e-2At4g34290SWIB complex BAF60b domain-containing proteinC.G.S.X.
0.032e-240Ta.28085.1.S1_atBQ170562--1e-1At4g34290SWIB complex BAF60b domain-containing proteinC.G.S.X.
0.042e-240Ta.2605.2.S1_x_atBJ226329--1e-16At3g4737040S ribosomal protein S20 (RPS20B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt3g51810824344EM1 (LATE EMBRYOGENESIS ABUNDANT 1)Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.---C.G.S.X.
0.039e-238Glycine maxPsAffx.psZS008xF10f_s_atPsAffx.psZS008xF10f--8e-2At4g28300hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.043e-238Hordeum vulgareContig13050_atContig13050--1e-6At3g16980NRPB9AC.G.S.X.
0.062e-654Oryza sativaOs01g0815700AK073519.1-Zn-finger, Ran-binding domain containing protein5e-10At5g17790VAR3 (VARIEGATED 3)C.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.031e+032Vitis vinifera1621554_s_atCF511998similar to Os03g0670700-4e-6At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)C.G.S.X.
0.043e-238Zea maysZm.9415.2.A1_atBM348481--7e-2At5g01075beta-galactosidaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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