CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.51433.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 72.4 TaAffx.51433.1.S1_x_at CA725024 - - 1e+0 At4g34700 complex 1 family protein / LVR family protein S.X. H.G.
0.40 58.4 TaAffx.37405.1.S1_at BJ281037 - - 2e+1 At5g59410 - S.X. H.G.
0.36 51.9 TaAffx.56398.1.S1_at CA652546 - - 4e+0 At1g02360 chitinase, putative S.X. H.G.
0.17 19.8 TaAffx.29629.1.S1_at CA638499 - - 3e-1 At3g47550 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.15 17.1 Ta.952.2.S1_x_at CA640640 - - 4e+0 At2g34850 MEE25 (maternal effect embryo arrest 25) S.X. H.G.
0.04 5.8 Ta.24627.3.S1_at CA609321 - - 4e+0 At1g31580 ECS1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
26.8 99.8 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
18.1 99.7 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
17.1 99.6 GSM314260 tissue type: seedling, root - rep1 GSE12508 Transcription patterns during wheat development
13.0 99.4 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.0 99.0 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.2 98.8 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.1 98.8 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
7.6 98.7 GSM314262 tissue type: seedling, root - rep3 GSE12508 Transcription patterns during wheat development
7.4 98.6 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.8 97.2 GSM298088 Crown tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 4e-93 341 TaAffx.110945.1.S1_at CA638048 - - 8e+0 At1g18280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.28 7e-42 171 TaAffx.106196.1.S1_at CA723310 - - 3e+0 At5g02560 HTA12 C.G. S.X.
0.11 1e-3 44 TaAffx.58699.1.S1_at CA624648 - - 1e+0 At1g62500 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.04 1e-3 44 TaAffx.23900.1.S1_at CA728690 - - 4e+0 At4g09530 auxin-responsive family protein C.G. S.X.
0.04 7e-2 38 TaAffx.106547.1.S1_at CA716408 - - 1e+1 At4g03965 protein binding / zinc ion binding C.G. S.X.
0.03 7e-2 38 Ta.14227.1.S1_at CD869993 - - 1e-7 At5g35680 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative C.G. S.X.
0.08 3e-1 36 TaAffx.80772.1.S1_at CA692757 - - 3e+0 At2g01200 IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32) C.G. S.X.
0.03 3e-1 36 TaAffx.57940.1.S1_at CA620233 - - 4e+0 At4g22250 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 3e-1 36 TaAffx.57940.1.S1_x_at CA620233 - - 4e+0 At4g22250 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At4g34700 829622 complex 1 family protein / LVR family protein F:catalytic activity;P:photorespiration;C:mitochondrial membrane, plasma membrane, respiratory chain complex I;MFPO - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.psZS002xM09f_at PsAffx.psZS002xM09f - - 8e-2 At4g30670 unknown protein C.G. S.X.
0.04 5e-1 34 Hordeum vulgare Contig25503_at Contig25503 - - 3e-1 At1g62333 unknown protein C.G. S.X.
0.22 2e-16 87 Oryza sativa OsAffx.26676.1.A1_at - - - 0 C.G. S.X.
0.03 6e+0 32 Populus trichocarpa PtpAffx.67931.1.A1_at BP931197 hypothetical protein - 3e-32 At3g44160 chloroplast outer membrane protein-related C.G. S.X.
0.03 3e-1 34 Vitis vinifera 1609890_s_at CA817702 hypothetical protein LOC100252402 - 5e-53 At2g04520 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative C.G. S.X.
0.04 3e-2 38 Zea mays Zm.16531.2.A1_at BG841648 hypothetical protein LOC100273317 - 2e-12 At5g35680 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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