Gene omics information

Query gene ID	TaAffx.50913.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.50913.1.S1_at	CA733503	-	-	2e+1	At4g09467	-	S.X.	H.G.	Please select
0.64	83.6	Ta.19361.2.S1_at	CA650802	-	-	5e-15	At4g12650	-	S.X.	H.G.	Please select
0.58	79.2	TaAffx.110665.1.S1_at	CA656430	-	-	4e+0	At2g33250	unknown protein	S.X.	H.G.	Please select
0.56	78.6	Ta.2138.2.S1_at	CA632124	-	-	1e+0	At1g55840	SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein	S.X.	H.G.	Please select
0.44	64.5	TaAffx.78428.1.S1_at	CA732797	-	-	1e+0	At4g15610	integral membrane family protein	S.X.	H.G.	Please select
0.39	56.1	TaAffx.65688.1.S1_x_at	BJ232502	-	-	2e+1	At3g02480	ABA-responsive protein-related	S.X.	H.G.	Please select
0.38	54.7	TaAffx.83840.1.S1_at	CA649783	-	-	4e+0	At1g28170	sulfotransferase family protein	S.X.	H.G.	Please select
0.31	42.7	Ta.26652.1.A1_at	CD491481	-	-	1e-3	At1g36050	unknown protein	S.X.	H.G.	Please select
0.28	39.2	TaAffx.25411.1.S1_at	CA700489	-	-	4e+0	At4g35320	unknown protein	S.X.	H.G.	Please select
0.20	24.0	TaAffx.111311.1.S1_at	CA643595	-	-	1e+0	At1g61940	AtTLP4 (TUBBY LIKE PROTEIN 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
19.2	99.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
16.0	99.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.9	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.5	99.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.4	99.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.5	99.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	4e-53	206	TaAffx.70704.1.S1_at	BQ801617	-	-	1e+0	At2g34850	MEE25 (maternal effect embryo arrest 25)	C.G.	S.X.	Please select
0.04	2e-15	81	Ta.21022.1.S1_at	CA641912	-	-	2e-1	At3g62280	carboxylesterase/ hydrolase, acting on ester bonds	C.G.	S.X.	Please select
0.06	1e+0	32	TaAffx.53371.1.S1_at	CA693094	-	-	1e+1	At5g55650	unknown protein	C.G.	S.X.	Please select
0.04	5e+0	30	TaAffx.92123.1.S1_at	BJ279960	-	-	1e+0	At5g46430	60S ribosomal protein L32 (RPL32B)	C.G.	S.X.	Please select
0.04	5e+0	30	TaAffx.113106.1.S1_at	CA618005	-	-	4e+0	At1g25425	CLE43 (CLAVATA3/ESR-RELATED 43)	C.G.	S.X.	Please select
0.01	5e+0	30	Ta.5935.1.S1_at	CK154118	-	-	4e-53	At4g38780	splicing factor, putative	C.G.	S.X.	Please select
0.02	5e+0	30	Ta.4207.1.S1_a_at	BJ261209	-	-	5e-2	At1g29670	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.02	5e+0	30	Ta.4207.1.S1_x_at	BJ261209	-	-	5e-2	At1g29670	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.03	5e+0	30	Ta.4207.2.S1_at	BJ253228	-	-	4e-1	At2g42990	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e+1	28	Arabidopsis thaliana	At4g09467	6240782	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	7e+0	30	Glycine max	PsAffx.CL1983Contig1_s_at	PsAffx.CL1983Contig1	-	-	8e-2	At4g12280	copper amine oxidase family protein	C.G.	S.X.	Please select
0.10	1e-11	67	Hordeum vulgare	Contig13781_at	Contig13781	-	-	6e-6	At1g22330	RNA binding / nucleic acid binding / nucleotide binding	C.G.	S.X.	Please select
0.04	4e-2	38	Oryza sativa	Os01g0260800	AK071445.1	-	Conserved hypothetical protein	4e-1	At2g19270	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	7e+0	30	Populus trichocarpa	PtpAffx.200605.1.S1_at	pmrna1189	hypothetical protein	-	4e-5	At1g80070	SUS2 (ABNORMAL SUSPENSOR 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e+1	26	Vitis vinifera	1621179_at	CF413861	-	-	2e-1	At4g09070	-	C.G.	S.X.	Please select
0.03	8e+0	28	Zea mays	Zm.8389.1.A1_at	BM332407	hypothetical protein LOC100278110	-	3e-1	At2g36890	RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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