Gene omics information

Query gene ID	TaAffx.49705.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.93	98.7	TaAffx.49705.1.S1_at	CD865470	-	-	1e+1	At5g15581	unknown protein	S.X.	H.G.	Please select
0.43	62.2	TaAffx.113185.2.S1_at	CA617420	-	-	4e+0	At3g54940	-	S.X.	H.G.	Please select
0.38	54.7	Ta.28467.1.S1_at	AY173961.1	mitogen-activated protein kinase	-	1e+0	At5g55560	protein kinase family protein	S.X.	H.G.	Please select
0.34	48.1	Ta.30816.1.S1_s_at	CN008413	GID2L	-	2e-1	At1g49010	myb family transcription factor	S.X.	H.G.	Please select
0.33	46.9	Ta.28399.1.S1_x_at	CD865477	Metallothionein	-	7e+0	At5g02380	MT2B (METALLOTHIONEIN 2B)	S.X.	H.G.	Please select
0.32	44.4	Ta.30816.1.S1_at	CN008413	GID2L	-	2e-1	At1g49010	myb family transcription factor	S.X.	H.G.	Please select
0.30	40.9	Ta.2827.1.S1_x_at	CA647863	-	-	2e+1	At5g09510	40S ribosomal protein S15 (RPS15D)	S.X.	H.G.	Please select
0.28	39.2	Ta.7925.2.S1_a_at	BQ160949	-	-	2e-5	At3g13550	FUS9 (FUSCA 9)	S.X.	H.G.	Please select
0.23	29.0	TaAffx.107417.1.S1_at	CA700120	-	-	1e+1	At1g26798	Expressed protein	S.X.	H.G.	Please select
0.21	25.5	Ta.99.1.S1_at	CD866760	O-acetylserine (thiol) lyase	-	5e-18	At4g14880	OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.7	99.1	GSM143499	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.4	99.1	GSM143496	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.0	99.0	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.2	98.5	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.2	98.5	GSM143512	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.7	98.4	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.4	98.2	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM143511	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.1	98.1	GSM143513	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	6e-5	48	TaAffx.110783.1.S1_at	CA654494	-	-	4e+0	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	4e-3	42	Ta.4201.2.S1_at	BJ260972	-	-	7e-5	At4g33700	CBS domain-containing protein	C.G.	S.X.	Please select
0.04	4e-3	42	Ta.10127.2.A1_at	CD896393	-	-	3e-1	At1g75810	unknown protein	C.G.	S.X.	Please select
0.04	4e-3	42	Ta.10127.2.A1_a_at	CD896393	-	-	3e-1	At1g75810	unknown protein	C.G.	S.X.	Please select
0.04	4e-3	42	Ta.10127.2.A1_x_at	CD896393	-	-	3e-1	At1g75810	unknown protein	C.G.	S.X.	Please select
0.04	1e-2	40	TaAffx.12175.1.S1_at	BJ284473	-	-	5e+0	At3g48185	unknown protein	C.G.	S.X.	Please select
0.04	1e-2	40	Ta.4354.1.S1_s_at	CA709975	-	-	3e-14	At2g23840	HNH endonuclease domain-containing protein	C.G.	S.X.	Please select
0.04	1e-2	40	Ta.4354.1.S1_at	CA709975	-	-	3e-14	At2g23840	HNH endonuclease domain-containing protein	C.G.	S.X.	Please select
0.01	6e-2	38	Ta.13767.1.S1_at	AL820691	Fasciclin-like protein FLA13	-	2e-17	At3g03070	NADH-ubiquinone oxidoreductase-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e+1	30	Arabidopsis thaliana	At5g15581	6241099	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-2	40	Glycine max	GmaAffx.60584.1.S1_at	BQ613024	-	-	8e-1	At5g25140	CYP71B13	C.G.	S.X.	Please select
0.36	2e-139	494	Hordeum vulgare	Contig9521_at	Contig9521	-	-	3e+0	At3g29033	glycine-rich protein	C.G.	S.X.	Please select
0.24	5e-16	85	Oryza sativa	Os09g0292900	AK070984.1	-	Cyclin-like F-box domain containing protein	3e+0	At4g29460	phospholipase A2 gamma, secretory low molecular weight	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-2	40	Populus trichocarpa	PtpAffx.218377.1.S1_s_at	pmrna33971	hypothetical protein	-	9e+0	At5g07475	plastocyanin-like domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-3	40	Vitis vinifera	1616748_at	CF215206	hypothetical protein LOC100246856	-	2e-37	At3g49470	NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)	C.G.	S.X.	Please select
0.13	1e-16	85	Zea mays	Zm.14044.1.A1_at	CO520098	hypothetical protein LOC100275866	-	1e+0	At2g34120	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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