CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.46757.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.3 TaAffx.46757.1.A1_at BJ319024 - - 4e+0 At5g65158 - S.X. H.G.
0.65 83.9 Ta.4690.1.S1_at CD907632 - - 1e+0 At3g60290 oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors S.X. H.G.
0.61 82.0 Ta.26165.1.A1_at CD452435 - - 5e+0 At5g54600 50S ribosomal protein L24, chloroplast (CL24) S.X. H.G.
0.58 79.2 Ta.18077.1.S1_at BF293924 - - 5e+0 At5g62623 - S.X. H.G.
0.56 78.6 Ta.6996.1.S1_at BJ317930 - - 7e-1 At5g11600 unknown protein S.X. H.G.
0.55 76.8 Ta.11969.1.A1_a_at CK208221 - - 5e+0 At5g58500 LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5) S.X. H.G.
0.53 74.9 Ta.4686.1.S1_at CK151514 - - 2e-1 At1g48980 oxidoreductase S.X. H.G.
0.50 72.4 Ta.26440.1.A1_at CD490830 - - 1e+0 At4g01265 raffinose synthase family protein / seed imbibition protein-related S.X. H.G.
0.49 69.7 Ta.7477.1.S1_at CK209166 - - 2e+0 At1g38630 unknown protein S.X. H.G.
0.48 69.0 Ta.30930.1.S1_at BJ312106 - - 1e+0 At3g05830 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.0 99.0 GSM298075 Crown tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
7.3 98.6 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
7.3 98.6 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0 98.5 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
6.1 98.1 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8 97.9 GSM139917 Anther leptotene-pachytene rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8 97.9 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.7 97.9 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6 97.8 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4 97.7 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 6e-21 101 Ta.26141.1.S1_at CD452947 - - 8e-3 At5g04250 OTU-like cysteine protease family protein C.G. S.X.
0.03 3e-1 36 Ta.6168.1.A1_at BJ297207 - - 2e+1 At5g55990 CBL2 (CALCINEURIN B-LIKE 2) C.G. S.X.
0.03 1e+0 34 TaAffx.89901.2.S1_at BJ300957 - - 3e-7 At1g69420 zinc finger (DHHC type) family protein C.G. S.X.
0.03 1e+0 34 Ta.12271.1.A1_at BQ171986 - - 9e-1 At2g28305 unknown protein C.G. S.X.
0.02 4e+0 32 TaAffx.36646.1.S1_at BJ322742 - - 6e-13 At2g33540 CPL3 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3) C.G. S.X.
0.01 4e+0 32 Ta.7658.1.S1_at CD490484 - - 3e-28 At1g50030 TOR (TARGET OF RAPAMYCIN) C.G. S.X.
0.03 2e+1 30 TaAffx.87197.1.S1_at CA594150 - - 2e+1 At5g42797 LCR28 (Low-molecular-weight cysteine-rich 28) C.G. S.X.
0.03 2e+1 30 TaAffx.86413.1.S1_at CA608902 - - 8e-14 At3g16340 PDR1 C.G. S.X.
0.03 2e+1 30 TaAffx.85135.1.S1_at CA625309 - - 4e+0 At5g19340 unknown protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Arabidopsis thaliana At5g65158 3771559 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM - - - C.G. S.X.
0.03 6e+0 32 Glycine max HgAffx.12792.1.A1_at CK349514 - - 5e+0 At5g63740 zinc finger protein-related C.G. S.X.
0.17 8e-3 40 Hordeum vulgare rbags17a06_s_at rbags17a06 - - 1e+0 At5g42300 UBL5 (UBIQUITIN-LIKE PROTEIN 5) C.G. S.X.
0.09 9e-6 52 Oryza sativa Os03g0859800 AK071971.1 - Ovarian tumour, otubain domain containing protein 4e-2 At5g03330 OTU-like cysteine protease family protein C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.67727.1.A1_at DN486398 hypothetical protein - 8e-1 At1g52315 unknown protein C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1617891_at CF372536 hypothetical protein LOC100268049 - 4e+0 At5g38370 zinc ion binding C.G. S.X.
0.14 8e-9 59 Zea mays Zm.18341.1.A1_at CA398444 cysteine-type peptidase - 4e-4 At5g04250 OTU-like cysteine protease family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage