CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.4445.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.38 54.7 TaAffx.4445.1.S1_at CA741494 - - 1e-3 At1g26560 BGLU40 (BETA GLUCOSIDASE 40) S.X. H.G.
0.14 15.8 TaAffx.5837.1.S1_at CA697606 - - 4e+0 At4g20410 GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN) S.X. H.G.
0.06 7.6 Ta.18662.1.S1_at CA640227 - - 6e+0 At2g33855 unknown protein S.X. H.G.
0.03 4.7 TaAffx.85597.3.S1_x_at CA617533 - - 2e+1 At2g31600 unknown protein S.X. H.G.
0.02 3.6 TaAffx.9484.1.S1_at CA597224 - - 7e-2 At1g33520 MOS2 (modifier of snc1, 2) S.X. H.G.
0.02 3.6 Ta.24791.1.A1_at AY217116.1 NBS-LRR type resistance protein - 2e+0 At5g58412 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
67.5 100.0 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
52.9 99.9 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
16.7 99.6 GSM315203 target strand labeled: Antisense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
10.9 99.3 GSM246395 SB69_Stem_ rep2_at anthesis GSE9767 Genotypic differences in water soluble carbohydrate metabolism in stem
9.1 99.0 GSM298093 Crown tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
8.8 98.9 GSM143501 Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.4 98.6 GSM143519 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.7 98.4 GSM314255 tissue type: germinating seed, root - rep2 GSE12508 Transcription patterns during wheat development
6.5 98.3 GSM298068 Leaf tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
5.8 97.9 GSM143490 Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-2 40 Ta.6249.1.S1_at BJ300528 - - 4e+0 At1g36100 myosin heavy chain-related C.G. S.X.
0.04 7e-2 38 Ta.5991.2.S1_at BJ258436 - - 1e-6 At1g26560 BGLU40 (BETA GLUCOSIDASE 40) C.G. S.X.
0.02 3e-1 36 Ta.9950.1.S1_at BJ235392 - - 3e+0 At5g52210 ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) C.G. S.X.
0.03 1e+0 34 TaAffx.5398.1.S1_at CA712254 - - 4e+0 At1g52615 unknown gene C.G. S.X.
0.04 1e+0 34 TaAffx.25411.1.S1_at CA700489 - - 4e+0 At4g35320 unknown protein C.G. S.X.
0.03 1e+0 34 TaAffx.117314.1.S1_at CK161437 - - 1e-1 At4g16240 unknown protein C.G. S.X.
0.03 1e+0 34 Ta.9638.2.S1_a_at CA661653 - - 1e-3 At1g34350 unknown protein C.G. S.X.
0.02 1e+0 34 Ta.9638.1.S1_at CK216022 - - 8e-3 At1g34350 unknown protein C.G. S.X.
0.02 1e+0 34 Ta.8295.1.A1_at BQ161706 - - 9e-9 At2g31300 ARPC1B (ACTIN-RELATED PROTEIN C1B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-3 44 Arabidopsis thaliana At1g26560 839196 BGLU40 (BETA GLUCOSIDASE 40) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:apoplast, chloroplast;BOPMFA - - - C.G. S.X.
0.12 3e-5 50 Glycine max GmaAffx.74120.1.S1_at BI945865 - - 2e-11 At1g61810 BGLU45 (BETA-GLUCOSIDASE 45) C.G. S.X.
0.03 5e-1 34 Hordeum vulgare Contig11996_s_at Contig11996 - - 1e+0 At1g10100 unknown protein C.G. S.X.
0.15 2e-43 176 Oryza sativa Os04g0474800 AK100820.1 - Glycoside hydrolase, family 1 protein 3e-3 At5g42260 BGLU12 (BETA GLUCOSIDASE 12) C.G. S.X.
0.12 4e-1 36 Populus trichocarpa PtpAffx.55714.1.S1_s_at CX177745 hypothetical protein - 9e-5 At5g54570 BGLU41 (BETA GLUCOSIDASE 41) C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1607118_at CB982987 - - 2e+0 At3g61090 unknown protein C.G. S.X.
0.05 5e-1 34 Zea mays Zm.17439.1.A1_at CK347738 hypothetical protein LOC100278297 - 6e-9 At3g06180 structural constituent of ribosome C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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