CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.40189.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 79.8 TaAffx.40189.1.S1_at AJ613550 - - 5e-1 At3g23680 F-box family protein-related S.X. H.G.
0.63 83.1 Ta.28600.3.S1_x_at CA641063 - - 4e-9 At3g45010 scpl48 (serine carboxypeptidase-like 48) S.X. H.G.
0.61 82.0 Ta.28600.2.S1_a_at CA720107 - - 1e-7 At3g45010 scpl48 (serine carboxypeptidase-like 48) S.X. H.G.
0.59 79.8 TaAffx.46126.1.S1_at CA597623 - - 4e+0 At2g14288 - S.X. H.G.
0.46 66.8 Ta.28600.2.S1_at CA720107 - - 1e-7 At3g45010 scpl48 (serine carboxypeptidase-like 48) S.X. H.G.
0.35 49.8 Ta.20696.1.S1_at BQ804501 - - 1e+1 At5g04180 ACA3 (ALPHA CARBONIC ANHYDRASE 3) S.X. H.G.
0.31 42.7 Ta.28600.1.S1_at BE443069 - - 2e-9 At3g45010 scpl48 (serine carboxypeptidase-like 48) S.X. H.G.
0.20 24.0 Ta.16251.2.S1_a_at CA603407 - - 7e+0 At5g56070 unknown protein S.X. H.G.
0.19 22.4 Ta.16251.2.S1_x_at CA603407 - - 7e+0 At5g56070 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.1 99.3 GSM314273 tissue type: floral bracts, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
7.9 98.7 GSM138188 genotype F38a developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.1 98.5 GSM314272 tissue type: floral bracts, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
6.0 98.0 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
5.2 97.5 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
4.7 97.1 GSM111221 genotype H23 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.5 96.9 GSM138168 genotype B68 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4 96.8 GSM111236 genotype F38b developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3 96.7 GSM138169 genotype B68 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1 96.4 GSM138170 genotype C31 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-12 73 TaAffx.120115.1.S1_at BJ243730 - - 1e+1 At5g53490 thylakoid lumenal 17.4 kDa protein, chloroplast C.G. S.X.
0.02 5e-4 46 Ta.9958.1.S1_at BJ240805 - - 2e+0 At3g46570 glycosyl hydrolase family 17 protein C.G. S.X.
0.03 3e-2 40 TaAffx.105705.1.S1_at CA730919 - - 4e+0 At1g64700 unknown protein C.G. S.X.
0.03 5e-1 36 Ta.28038.1.S1_a_at BJ214918 - - 7e+0 At4g29110 unknown protein C.G. S.X.
0.03 5e-1 36 Ta.28038.1.S1_at BJ214918 - - 7e+0 At4g29110 unknown protein C.G. S.X.
0.01 5e-1 36 Ta.1200.1.S1_at CA665158 Xylanase inhibitor protein I - 4e+1 At5g42680 unknown protein C.G. S.X.
0.01 5e-1 36 Ta.1200.1.S1_x_at CA665158 Xylanase inhibitor protein I - 4e+1 At5g42680 unknown protein C.G. S.X.
0.02 2e+0 34 TaAffx.84262.1.S1_at CA641290 - - 2e+0 At3g25597 unknown protein C.G. S.X.
0.02 2e+0 34 TaAffx.73741.2.S1_at CA708605 - - 4e+0 At1g71750 phosphoribosyltransferase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At3g23680 821948 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 2e-1 38 Glycine max PsAffx.C75000061_at PsAffx.C75000061 - - 7e-1 At2g36620 RPL24A (ribosomal protein L24) C.G. S.X.
0.08 1e-6 54 Hordeum vulgare Contig15998_at Contig15998 - - 4e-1 At1g58380 XW6 C.G. S.X.
0.08 7e-8 59 Oryza sativa OsAffx.3992.1.S1_at - - - 0 C.G. S.X.
0.03 1e+1 32 Populus trichocarpa PtpAffx.224104.1.S1_at pmrna42342 hypothetical protein - 6e-1 At4g33160 ubiquitin-protein ligase C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1618816_at BQ796222 hypothetical protein LOC100256132 - 6e-6 At1g05780 unknown protein C.G. S.X.
0.03 2e-1 36 Zea mays Zm.779.1.A1_at BG842450 RING-H2 finger protein - 8e+0 At4g33020 ZIP9 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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