CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.40.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 72.4 TaAffx.40.1.S1_at AJ615341 - - 8e-5 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related S.X. H.G.
0.44 64.5 Ta.28377.2.S1_s_at CA699777 - - 7e-4 At5g13170 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) S.X. H.G.
0.38 54.7 Ta.9137.1.S1_at BQ842448 - - 9e-6 At3g13062 - S.X. H.G.
0.36 51.9 Ta.28377.2.S1_x_at CA699777 - - 7e-4 At5g13170 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) S.X. H.G.
0.32 44.4 Ta.10739.1.A1_at BQ166440 - - 4e-1 At1g63600 protein kinase-related S.X. H.G.
0.31 42.7 Ta.13621.1.S1_at BQ171971 - - 2e-19 At2g36895 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.7 99.1 GSM143521 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.3 99.0 GSM324484 Si- B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.4 98.9 GSM143493 Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.3 98.8 GSM324486 Si- B- rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.2 98.8 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.5 98.6 GSM143523 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.2 98.5 GSM143518 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.2 98.5 GSM324490 Si+ B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.1 98.5 GSM143508 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.9 98.4 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 5e-37 155 TaAffx.107872.1.S1_at CA694087 - - 2e+1 At5g52440 HCF106 C.G. S.X.
0.09 6e-15 81 Ta.7699.1.S1_at BJ277130 - - 4e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.09 6e-15 81 Ta.7699.1.S1_x_at BJ277130 - - 4e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.08 2e-14 79 Ta.1107.1.A1_at BE416288 - - 5e-3 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.05 6e-12 71 Ta.9697.1.S1_s_at BJ242494 - - 1e-3 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.04 4e-10 65 Ta.4941.1.S1_at BT009077.1 - - 5e-4 At5g66110 metal ion binding C.G. S.X.
0.05 9e-5 48 TaAffx.85895.1.S1_at CA618644 - - 4e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.04 9e-5 48 Ta.26534.1.A1_at CD491157 - - 1e+0 At3g25855 unknown protein C.G. S.X.
0.05 9e-5 48 Ta.11657.1.A1_at CA603506 - - 4e-1 At1g72080 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 8e-5 48 Arabidopsis thaliana At1g22990 838907 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFM - - - C.G. S.X.
0.07 3e-2 40 Glycine max Gma.17971.2.S1_s_at AW310947 - - 9e-1 At1g68905 - C.G. S.X.
0.57 2e-167 587 Hordeum vulgare Contig3058_at Contig3058 - - 2e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.24 8e-19 95 Oryza sativa OsAffx.6821.1.S1_x_at - - - 0 C.G. S.X.
0.03 4e-1 36 Populus trichocarpa PtpAffx.210669.1.S1_x_at pmrna20922 - - 1e-22 At5g50740 metal ion binding C.G. S.X.
0.09 4e-7 54 Vitis vinifera 1618647_x_at CK138177.1 - - 4e-6 At5g60800 heavy-metal-associated domain-containing protein C.G. S.X.
0.23 1e-23 109 Zea mays Zm.2647.1.A1_at BG268724 hypothetical protein LOC100192886 - 1e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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