Gene omics information

Query gene ID TaAffx.3984.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.0TaAffx.3984.1.S1_atCD938015--7e+0At5g56840DNA-binding family proteinS.X.H.G.
0.6786.3TaAffx.118990.1.A1_atBJ298906--1e+1At5g60880unknown proteinS.X.H.G.
0.5576.8Ta.9520.2.A1_atBJ229796--4e-4At5g27640TIF3B1 (TRANSLATION INITIATION FACTOR 3B1)S.X.H.G.
0.5374.9Ta.6624.1.S1_a_atCK208299--4e-4At2g29530mitochondrial import inner membrane translocase (TIM10)S.X.H.G.
0.4666.8Ta.5254.1.S1_atBJ219348--2e-15At4g30220RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)S.X.H.G.
0.4565.2Ta.2299.3.S1_a_atCA672009--4e+0At2g42220rhodanese-like domain-containing proteinS.X.H.G.
0.4464.5Ta.2044.1.S1_atCN009661--4e-38At3g6024560S ribosomal protein L37a (RPL37aC)S.X.H.G.
0.4058.4Ta.12395.1.S1_atCK208181--2e-2At5g15610proteasome family proteinS.X.H.G.
0.1415.8Ta.2044.1.S1_x_atCN009661--4e-38At3g6024560S ribosomal protein L37a (RPL37aC)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.497.7GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.797.1GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.296.6GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.296.6GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.296.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
4.096.3GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.996.1GSM138175genotype A81 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.896.0GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.795.8GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.695.6GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.682e-166585TaAffx.3984.3.S1_x_atBJ224370--1e+0At4g33660unknown proteinC.G.S.X.
0.682e-166585TaAffx.3984.3.S1_atBJ224370--1e+0At4g33660unknown proteinC.G.S.X.
0.474e-143508TaAffx.3984.4.S1_atCA648989--7e-2At5g24318catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.589e-129460TaAffx.3984.2.S1_atCD899327--2e+0At4g33660unknown proteinC.G.S.X.
0.174e-2099TaAffx.85786.1.S1_atCA619644--4e+0At3g25910zinc ion bindingC.G.S.X.
0.065e-446TaAffx.123914.1.S1_atCN009931--1e+0At4g05400unknown proteinC.G.S.X.
0.014e-136Ta.20654.1.S1_a_atCA698831--2e-10At5g12470unknown proteinC.G.S.X.
0.014e-136Ta.20654.1.S1_x_atCA698831--2e-10At5g12470unknown proteinC.G.S.X.
0.032e+034TaAffx.52993.1.S1_atCA697970--3e+0At4g37530peroxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e+032Arabidopsis thalianaAt5g56840835786DNA-binding family proteinF:transcription factor activity, DNA binding, nucleic acid binding;P:regulation of transcription;C:unknown;PO---C.G.S.X.
0.034e-240Glycine maxGma.2894.2.S1_atBQ295958--3e+0At2g01818zinc ion bindingC.G.S.X.
0.722e-137488Hordeum vulgareContig5242_atContig5242--3e-1At2g30560glycine-rich proteinC.G.S.X.
0.341e-67258Oryza sativaOs01g0299400AK107814.1-Sterile alpha motif homology domain containingprotein3e-1At5g53030unknown proteinC.G.S.X.
0.039e+032Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.032e+032Vitis vinifera1620648_atCD008794hypothetical protein LOC100256959-1e+0At4g27380unknown proteinC.G.S.X.
0.022e-136Zea maysZm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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