CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.38843.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 82.0 TaAffx.38843.1.S1_at BJ208630 - - 2e-1 At5g49710 unknown protein S.X. H.G.
0.67 86.3 Ta.22146.2.S1_a_at CA641760 - - 1e+0 At4g33730 pathogenesis-related protein, putative S.X. H.G.
0.46 66.8 Ta.22146.2.S1_x_at CA641760 - - 1e+0 At4g33730 pathogenesis-related protein, putative S.X. H.G.
0.40 58.4 Ta.6725.2.S1_x_at BJ240243 - - 8e-14 At3g60240 - S.X. H.G.
0.40 58.4 Ta.21296.1.S1_at CA670118 - - 1e+0 At4g09260 unknown protein S.X. H.G.
0.27 35.6 Ta.2920.1.A1_a_at BJ242939 - - 3e+0 At2g25605 unknown protein S.X. H.G.
0.15 17.1 Ta.2703.1.S1_at CD452813 - - 2e-46 At4g02480 AAA-type ATPase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 97.4 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
4.1 96.4 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
4.1 96.4 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
4.0 96.3 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4 95.2 GSM314271 tissue type: immature inflorescence - rep3 GSE12508 Transcription patterns during wheat development
3.3 95.0 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
3.3 95.0 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2 94.8 GSM138209 genotype H23 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1 94.5 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1 94.5 GSM138166 genotype G30 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 1e-12 73 Ta.26122.1.A1_at CD452820 1,3-beta-glucan synthase 19-like - 2e-3 At2g13680 CALS5 (CALLOSE SYNTHASE 5) C.G. S.X.
0.11 3e-10 65 TaAffx.22807.1.S1_at CA744760 - - 1e+0 At5g17190 unknown protein C.G. S.X.
0.09 6e-8 57 Ta.4609.1.S1_at BJ268643 1,3-beta-glucan synthase 23-like - 3e-1 At3g25910 zinc ion binding C.G. S.X.
0.08 4e-6 52 TaAffx.669.1.A1_at CD490322 - - 3e+0 At1g17345 auxin-responsive protein-related C.G. S.X.
0.10 2e-5 50 Ta.25520.1.S1_at BE492039 1,3-beta-glucan synthase 12-like - 7e-6 At3g07160 ATGSL10 (glucan synthase-like 10) C.G. S.X.
0.23 2e-4 46 TaAffx.113172.1.S1_at CA617488 - - 4e+0 At4g15710 unknown protein C.G. S.X.
0.02 6e-2 38 Ta.27065.1.S1_at BT009366.1 - - 1e+0 At2g05600 - C.G. S.X.
0.04 2e-1 36 TaAffx.28610.1.S1_at CA658297 - - 3e-4 At3g48000 ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4) C.G. S.X.
0.03 9e-1 34 TaAffx.91465.1.S1_at BJ322681 - - 7e-3 At1g27390 TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-1 36 Arabidopsis thaliana At5g49710 835034 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPMOF - - - C.G. S.X.
0.04 3e-1 36 Glycine max GmaAffx.33274.1.S1_at BU550921 - - 3e-2 At3g10210 - C.G. S.X.
0.34 0 718 Hordeum vulgare Contig4949_at Contig4949 - - 3e-53 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
0.12 4e-35 149 Oryza sativa Os02g0832500 AK105109.1 - Glycosyl transferase, family 48 protein 3e-66 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
0.18 1e-3 44 Populus trichocarpa Ptp.3567.1.S1_s_at DN493079 hypothetical protein - 4e-16 At2g31960 ATGSL03 (GLUCAN SYNTHASE-LIKE 3) C.G. S.X.
0.05 3e-1 34 Vitis vinifera 1617831_at CA813852 hypothetical protein LOC100262207 - 2e-6 At2g27470 NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11) C.G. S.X.
0.17 2e-18 91 Zea mays Zm.13598.1.A1_at AY107727.1 - - 2e-27 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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