Gene omics information

Query gene ID TaAffx.38158.4.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7991.3TaAffx.38158.4.S1_x_atCA630021--1e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5173.0Ta.22762.3.S1_a_atCA614703steroid membrane binding protein-like-2e-16At3g48890ATMP2S.X.H.G.
0.5173.0Ta.959.2.S1_atCD904099--1e+0At5g16990NADP-dependent oxidoreductase, putativeS.X.H.G.
0.5072.4Ta.23895.1.S1_x_atCK205337--3e-55At4g34720AVA-P1S.X.H.G.
0.4869.0Ta.9326.1.S1_a_atCA705658--4e-2At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)S.X.H.G.
0.4666.8Ta.1892.1.S1_atCK163495Vacuolar ATPase subunit G-2e-6At4g23710VAG2S.X.H.G.
0.4362.2Ta.9326.1.S1_x_atCA705658--4e-2At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)S.X.H.G.
0.4362.2Ta.14353.1.S1_atBU100478--5e-4At5g52200unknown proteinS.X.H.G.
0.4159.6Ta.13231.1.S1_atBJ286554vacuolar proton ATPase subunit E-7e-35At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)S.X.H.G.
0.3956.1Ta.357.1.S1_atBJ239138--8e-20At5g22060ATJ2S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.398.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.296.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
3.896.0GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.795.8GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
3.094.3GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.893.6GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.793.3GSM298074Crown tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.592.5GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.492.0GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.391.5GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000906TaAffx.38158.4.S1_s_atCA630021--1e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.400632TaAffx.38158.1.S1_atBJ253274--3e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.704e-123440TaAffx.38158.3.S1_atCA712114--2e-2At2g44330zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.196e-548TaAffx.38158.2.A1_atCA677437--4e+0At5g02470DPAC.G.S.X.
0.031e+034TaAffx.90025.1.S1_atBQ609553--7e-2At5g47830unknown proteinC.G.S.X.
0.031e+034TaAffx.85356.1.S1_atCA619637--6e-27At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
0.031e+034TaAffx.84201.1.S1_atCA642506--4e+0At5g65720NFS1C.G.S.X.
0.021e+034TaAffx.66093.1.S1_atBJ208178--9e-3At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.021e+034Ta.2777.2.S1_a_atBJ318404small Ran-related GTP-binding protein-2e-118At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-344Arabidopsis thalianaAt2g44330819040zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV---C.G.S.X.
0.083e-136Glycine maxGma.1842.1.S1_atCD394548--1e-8At3g56580zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.419e-166581Hordeum vulgareContig16921_atContig16921--3e-3At2g40830RHC1AC.G.S.X.
0.296e-96351Oryza sativaOs03g0351800AK070491.1-Zn-finger, RING domain containing protein3e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.075e-342Populus trichocarpaPtpAffx.213021.1.S1_atpmrna25459hypothetical protein-2e-3At3g63530BB (BIG BROTHER)C.G.S.X.
0.063e-444Vitis vinifera1616646_atCF208648hypothetical protein LOC100244277-2e-3At2g39720RHC2AC.G.S.X.
0.313e-26117Zea maysZm.1166.1.S1_atCO521994RHC1A-2e-1At5g55570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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