Gene omics information

Query gene ID	TaAffx.37589.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	82.0	TaAffx.37589.1.A1_at	BJ272379	-	-	4e+0	At5g53895	unknown protein	S.X.	H.G.	Please select
0.53	74.9	Ta.24461.1.S1_x_at	CA657489	-	-	4e+0	At5g16050	GRF5 (GENERAL REGULATORY FACTOR 5)	S.X.	H.G.	Please select
0.29	39.2	Ta.9182.1.S1_at	CA600332	-	-	7e+0	At5g35670	iqd33 (IQ-domain 33)	S.X.	H.G.	Please select
0.29	39.2	Ta.7187.1.A1_at	BJ274182	-	-	2e-12	At4g27880	seven in absentia (SINA) family protein	S.X.	H.G.	Please select
0.22	27.1	Ta.9341.1.S1_at	CN012656	-	-	8e-1	At3g20570	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.15	17.1	Ta.16784.1.S1_at	CA612578	-	-	4e-6	At2g23140	binding / ubiquitin-protein ligase	S.X.	H.G.	Please select
0.14	15.8	Ta.9278.1.S1_s_at	CD492175	-	-	2e-1	At5g63640	VHS domain-containing protein / GAT domain-containing protein	S.X.	H.G.	Please select
0.11	12.4	Ta.6497.1.A1_at	BJ253632	-	-	2e+0	At3g60966	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.10	11.3	Ta.2712.2.S1_at	CD900855	-	-	1e-12	At1g75660	XRN3	S.X.	H.G.	Please select
0.04	5.8	TaAffx.19801.1.A1_at	CD913371	-	-	2e+0	At1g09140	SF2/ASF-like splicing modulator (SRP30)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.6	99.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.2	99.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	3e-13	75	Ta.12262.1.A1_at	BQ171968	-	-	6e-1	At2g37660	binding / catalytic/ coenzyme binding	C.G.	S.X.	Please select
0.09	1e+0	34	Ta.9014.1.A1_at	BQ162771	-	-	7e+0	At5g10504	unknown protein	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.65497.1.S1_at	BJ244210	-	-	5e-1	At1g29610	-	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.52906.1.S1_at	CA699165	-	-	2e+1	At5g65220	ribosomal protein L29 family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.119338.1.A1_at	BJ276549	-	-	1e+0	At3g47965	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.8182.1.S1_at	CD454249	-	-	6e+0	At2g07721	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.1622.1.S1_at	CA657969	-	-	2e-5	At1g54730	sugar transporter, putative	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.93197.1.A1_at	BJ220681	-	-	1e+0	At5g13050	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.86242.1.S1_x_at	CA613303	-	-	2e-1	At3g26510	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At5g53895	835471	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e+0	34	Glycine max	GmaAffx.64167.1.S1_x_at	BI892898	-	-	1e+0	At1g43415	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	Contig25339_at	Contig25339	-	-	7e-2	At5g57655	xylose isomerase family protein	C.G.	S.X.	Please select
0.01	5e-1	36	Oryza sativa	Os11g0518900	AK102677.1	-	Hypothetical protein	3e-1	At5g65207	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	PtpAffx.222132.1.S1_x_at	pmrna39362	hypothetical protein	-	1e+0	At3g20570	plastocyanin-like domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	30	Vitis vinifera	1617318_at	CF209178	hypothetical protein LOC100258316	-	4e-12	At5g23300	PYRD (pyrimidine d)	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.10725.2.S1_a_at	BQ539238	-	-	5e+0	At5g37290	armadillo/beta-catenin repeat family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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