Gene omics information

Query gene ID	TaAffx.36894.2.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.36894.2.S1_at	BJ303490	-	-	2e-2	At5g47500	pectinesterase family protein	S.X.	H.G.	Please select
0.73	89.1	Ta.20540.1.S1_x_at	CK216277	-	-	3e+0	At2g44581	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.73	89.1	Ta.20540.2.S1_at	CA725867	-	-	2e+0	At2g44581	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.61	82.0	Ta.20540.3.S1_x_at	BJ318550	-	-	1e+0	At2g44581	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.60	81.0	Ta.20540.3.S1_at	BJ318550	-	-	1e+0	At2g44581	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.36	51.9	Ta.6309.1.A1_at	BJ307663	-	-	5e-3	At5g43810	ZLL (ZWILLE)	S.X.	H.G.	Please select
0.32	44.4	Ta.6614.1.A1_x_at	BJ308909	-	-	2e+0	At2g39030	GCN5-related N-acetyltransferase (GNAT) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
40.4	99.9	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
37.9	99.9	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
33.7	99.9	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
25.4	99.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
21.6	99.7	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
17.4	99.6	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
12.4	99.4	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
9.3	99.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.1	98.8	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1104	TaAffx.36894.2.S1_s_at	BJ303490	-	-	2e-2	At5g47500	pectinesterase family protein	C.G.	S.X.	Please select
0.04	3e-4	46	TaAffx.99157.1.S1_at	CK211986	-	-	1e-2	At4g00190	pectinesterase family protein	C.G.	S.X.	Please select
0.04	1e-3	44	Ta.3826.1.S1_at	BJ254574	-	-	2e-3	At2g47040	VGD1 (VANGUARD1)	C.G.	S.X.	Please select
0.03	5e-3	42	Ta.5588.1.A1_at	BJ249930	-	-	9e-3	At3g06830	pectinesterase family protein	C.G.	S.X.	Please select
0.07	7e-2	38	Ta.1242.1.A1_at	BE422835	-	-	1e+0	At3g15534	unknown protein	C.G.	S.X.	Please select
0.05	3e-1	36	Ta.9687.1.S1_at	BJ226484	-	-	2e-1	At2g19300	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.64681.1.S1_at	BJ281435	-	-	7e-2	At2g31370	bZIP transcription factor (POSF21)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.121096.1.S1_at	CA661686	-	-	3e-1	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.5640.1.S1_at	BJ282669	-	-	3e+0	At5g58420	40S ribosomal protein S4 (RPS4D)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	2e-2	40	Arabidopsis thaliana	At5g47500	834800	pectinesterase family protein	F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-2	40	Glycine max	PsAffx.CL179Contig1_at	PsAffx.CL179Contig1	-	-	2e+1	At5g65040	senescence-associated protein-related	C.G.	S.X.	Please select
0.72	6e-161	565	Hordeum vulgare	HX03C24u_at	HX03C24u	-	-	1e-2	At5g47500	pectinesterase family protein	C.G.	S.X.	Please select
0.45	2e-105	383	Oryza sativa	Os04g0553500	AK067182.1	-	Pectinesterase family protein	5e-17	At5g47500	pectinesterase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e-1	38	Populus trichocarpa	PtpAffx.218759.1.S1_at	pmrna34485	hypothetical protein	-	1e+1	At5g38170	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-2	38	Vitis vinifera	1609285_at	CF414528	UPF0497 membrane protein 16	-	1e+0	At5g54980	integral membrane family protein	C.G.	S.X.	Please select
0.30	3e-122	436	Zea mays	Zm.7152.1.A1_at	AY110483.1	hypothetical protein LOC100216962	-	7e-5	At5g47500	pectinesterase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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