Gene omics information

Query gene ID	TaAffx.3444.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	TaAffx.3444.1.S1_at	BQ801852	-	-	2e-6	At1g02080	transcriptional regulator-related	S.X.	H.G.	Please select
0.55	76.8	Ta.30926.1.S1_at	CD895641	-	-	1e-6	At1g50410	SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein	S.X.	H.G.	Please select
0.50	72.4	Ta.5661.1.S1_at	BQ802737	-	-	1e-16	At3g43240	ARID/BRIGHT DNA-binding domain-containing protein	S.X.	H.G.	Please select
0.50	72.4	Ta.12406.1.S1_at	BQ166921	-	-	3e+0	At5g25870	unknown protein	S.X.	H.G.	Please select
0.44	64.5	Ta.20653.1.S1_at	CA708558	-	-	6e+0	At5g25090	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.33	46.9	Ta.11079.2.S1_at	CA655580	-	-	4e+0	At3g59430	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.8	96.0	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.0	94.3	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.6	92.9	GSM111209	genotype F36 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6	92.9	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.4	92.0	GSM111211	genotype B11 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.4	92.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	7e-34	145	Ta.13009.1.S1_at	CA485346	-	-	5e+0	At5g43620	S-locus protein-related	C.G.	S.X.	Please select
0.20	3e-17	89	Ta.5541.1.S1_at	CD373605	-	-	1e+0	At1g07900	LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)	C.G.	S.X.	Please select
0.20	3e-17	89	Ta.5541.1.S1_a_at	CD373605	-	-	1e+0	At1g07900	LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)	C.G.	S.X.	Please select
0.25	1e-13	77	Ta.5541.3.S1_at	BJ242729	-	-	4e+0	At4g27530	unknown protein	C.G.	S.X.	Please select
0.04	2e-3	44	Ta.14849.1.S1_at	CA683215	-	-	8e+0	At5g49250	beta-galactosidase	C.G.	S.X.	Please select
0.03	7e-3	42	TaAffx.64119.1.S1_at	BJ314515	-	-	2e-2	At3g07260	forkhead-associated domain-containing protein / FHA domain-containing protein	C.G.	S.X.	Please select
0.03	7e-3	42	TaAffx.37967.1.S1_at	BJ262529	-	-	1e+0	At3g53305	CYP71B32	C.G.	S.X.	Please select
0.03	7e-3	42	Ta.7605.2.A1_a_at	BJ236799	-	-	3e-13	At4g20930	3-hydroxyisobutyrate dehydrogenase, putative	C.G.	S.X.	Please select
0.04	7e-3	42	Ta.6708.3.S1_at	BJ304288	-	-	4e-2	At5g02240	binding / catalytic/ coenzyme binding	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-6	54	Arabidopsis thaliana	At1g02080	839244	transcriptional regulator-related	F:transcription regulator activity;P:unknown;C:membrane;MOFBP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	7e-13	75	Glycine max	GmaAffx.44143.1.S1_at	BU547730	-	-	2e-16	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select
0.46	0	938	Hordeum vulgare	Contig13695_at	Contig13695	-	-	2e-20	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select
0.10	2e-81	303	Oryza sativa	Os.4089.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	1e-14	81	Populus trichocarpa	PtpAffx.11426.1.A1_at	CV263606	hypothetical protein	-	9e-15	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-6	52	Vitis vinifera	1611218_at	CB912267	hypothetical LOC100261590	-	3e-1	At1g66360	C2 domain-containing protein	C.G.	S.X.	Please select
0.25	3e-18	91	Zea mays	Zm.7360.1.A1_at	CK827608	hypothetical protein LOC100273922	-	3e-27	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage