Gene omics information

Query gene ID	TaAffx.33907.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	82.0	TaAffx.33907.1.S1_at	AJ609988	-	-	8e+0	At5g03270	unknown protein	S.X.	H.G.	Please select
0.71	88.0	Ta.4686.1.S1_at	CK151514	-	-	2e-1	At1g48980	oxidoreductase	S.X.	H.G.	Please select
0.61	82.0	Ta.6996.1.S1_at	BJ317930	-	-	7e-1	At5g11600	unknown protein	S.X.	H.G.	Please select
0.52	73.7	Ta.27512.1.S1_at	BT009204.1	-	-	2e+0	At3g42310	unknown protein	S.X.	H.G.	Please select
0.48	69.0	Ta.7477.1.S1_at	CK209166	-	-	2e+0	At1g38630	unknown protein	S.X.	H.G.	Please select
0.47	67.9	Ta.11969.1.A1_a_at	CK208221	-	-	5e+0	At5g58500	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)	S.X.	H.G.	Please select
0.44	64.5	Ta.9639.1.A1_a_at	BJ322395	-	-	4e-1	At5g03960	IQD12 (IQ-domain 12)	S.X.	H.G.	Please select
0.43	62.2	Ta.10234.1.A1_at	CD910254	-	-	2e+0	At2g15710	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	S.X.	H.G.	Please select
0.40	58.4	Ta.11601.1.A1_at	BQ170431	-	-	3e+0	At3g17460	PHD finger family protein	S.X.	H.G.	Please select
0.19	22.4	Ta.7222.1.A1_at	BJ322973	-	-	3e-5	At2g45830	DTA2 (DOWNSTREAM TARGET OF AGL15 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.8	99.1	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.3	98.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.3	98.8	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.4	98.6	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
6.3	98.2	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	TaAffx.31.1.S1_at	AJ615613	-	-	3e+0	At3g24890	ATVAMP728	C.G.	S.X.	Please select
0.02	8e+0	32	TaAffx.94593.1.S1_at	CA733739	-	-	1e-1	At1g48370	YSL8 (YELLOW STRIPE LIKE 8)	C.G.	S.X.	Please select
0.02	8e+0	32	TaAffx.4907.1.S1_at	CA728852	-	-	1e+0	At5g28295	unknown protein	C.G.	S.X.	Please select
0.02	8e+0	32	TaAffx.108841.1.S1_at	CA683413	-	-	3e+0	At5g63634	unknown protein	C.G.	S.X.	Please select
0.01	8e+0	32	Ta.7657.1.S1_s_at	CK208353	-	-	1e-18	At1g30620	MUR4 (MURUS 4)	C.G.	S.X.	Please select
0.02	8e+0	32	Ta.29620.1.S1_at	CA647669	-	-	1e+0	At2g32710	KRP4	C.G.	S.X.	Please select
0.01	8e+0	32	Ta.2965.1.S1_at	CA643074	-	-	3e-4	At2g25970	KH domain-containing protein	C.G.	S.X.	Please select
0.01	8e+0	32	Ta.27020.1.S1_at	CD891344	-	-	3e+0	At3g63040	unknown protein	C.G.	S.X.	Please select
0.02	8e+0	32	Ta.26155.1.A1_at	CD453053	-	-	8e-2	At5g19860	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e+0	32	Arabidopsis thaliana	At5g03270	831890	unknown protein	F:molecular_function unknown;P:lysine biosynthetic process via diaminopimelate;C:unknown;BOPFMA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	3e+0	34	Glycine max	Gma.9124.1.A1_s_at	CD416907	-	-	2e+0	At5g40630	ubiquitin family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Hordeum vulgare	Contig9821_at	Contig9821	UDP-D-xylose epimerase 3	-	6e-3	At2g34850	MEE25 (maternal effect embryo arrest 25)	C.G.	S.X.	Please select
0.29	1e-43	178	Oryza sativa	Os.15074.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	3e-3	44	Populus trichocarpa	Ptp.328.1.A1_at	CK088363	jumonji domain protein	-	1e+0	At3g56120	Met-10+ like family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	2e+0	32	Vitis vinifera	1616395_at	CF517518	-	-	2e-2	At3g15820	phosphatidic acid phosphatase-related / PAP2-related	C.G.	S.X.	Please select
0.03	1e+1	30	Zea mays	ZmAffx.1198.1.A1_at	BE056195	-	-	2e-1	At1g75040	PR5 (PATHOGENESIS-RELATED GENE 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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