Gene omics information

Query gene ID TaAffx.30673.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5678.6TaAffx.30673.1.S1_atCA623010--7e-11At4g25630FIB2 (FIBRILLARIN 2)S.X.H.G.
0.9198.2TaAffx.58533.1.S1_atCA618813--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)S.X.H.G.
0.8393.4TaAffx.31791.1.S1_atCA607567--7e-1At5g26717-S.X.H.G.
0.8092.2Ta.1965.1.S1_atCA634037--6e-3At4g23330eukaryotic translation initiation factor-relatedS.X.H.G.
0.8092.2TaAffx.8469.1.S1_atCA624919--1e+1At4g13140-S.X.H.G.
0.5779.2TaAffx.84292.1.S1_atCA640524--2e+0At4g05070unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.898.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.498.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.898.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.998.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
5.397.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.297.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.697.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.896.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.595.4GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.495.2GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.284e-68258Ta.28770.1.S1_x_atBM135093--5e-39At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.284e-68258Ta.28770.1.S1_atBM135093--5e-39At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.251e-34147Ta.28770.3.S1_x_atBJ225774--3e-4At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.292e-32139Ta.21926.1.S1_atCD917473--8e-37At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.292e-32139Ta.21926.1.S1_a_atCD917473--8e-37At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.292e-32139Ta.21926.1.S1_x_atCD917473--8e-37At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.027e-238Ta.2780.1.S1_atBJ219268NADPH-thioredoxin reductase-7e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)C.G.S.X.
0.023e-136Ta.9721.1.A1_a_atBJ311106--1e-2At3g52210mRNA capping enzyme family proteinC.G.S.X.
0.023e-136Ta.28034.1.A1_atCD454974--2e+0At5g04250OTU-like cysteine protease family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.077e-1167Arabidopsis thalianaAt4g25630828668FIB2 (FIBRILLARIN 2)encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.---C.G.S.X.
0.051e-344Glycine maxGma.18058.1.S1_atCD391958--6e-72At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.347e-71266Hordeum vulgareContig3457_x_atContig3457--3e-43At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.412e-96353Oryza sativaOs02g0821800AK103477.1-Fibrillarin (Fragment)2e-41At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.082e-240Populus trichocarpaPtp.1863.1.S1_s_atCX175638hypothetical protein-3e-89At4g25630FIB2 (FIBRILLARIN 2)C.G.S.X.
0.041e+032Vitis vinifera1616431_atCF605090--7e-2At3g57500unknown proteinC.G.S.X.
0.490753Zea maysZm.4797.1.A1_atAY103804.1fibrillarin-2-8e-16At5g52470FIB1 (FIBRILLARIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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