Gene omics information

Query gene ID	TaAffx.30598.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.30598.1.S1_at	CA623743	-	-	1e+0	At3g05230	signal peptidase subunit family protein	S.X.	H.G.	Please select
0.75	89.8	TaAffx.29732.1.S1_at	CA636473	-	-	7e-1	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	S.X.	H.G.	Please select
0.67	86.3	TaAffx.50210.1.S1_at	CA744417	-	-	7e-2	At1g60880	AGL56	S.X.	H.G.	Please select
0.63	83.1	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select
0.59	79.8	TaAffx.5596.1.S1_at	CA705635	-	-	3e+0	At1g12250	thylakoid lumenal protein-related	S.X.	H.G.	Please select
0.48	69.0	TaAffx.55653.1.S1_at	CA663094	-	-	1e+1	At4g20030	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.37	53.0	Ta.3911.2.S1_s_at	CA604151	-	-	4e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	S.X.	H.G.	Please select
0.36	51.9	TaAffx.78861.1.S1_at	CA725589	-	-	1e+1	At3g28070	nodulin MtN21 family protein	S.X.	H.G.	Please select
0.36	51.9	TaAffx.3664.1.S1_at	CD876496	-	-	2e+0	At2g47710	universal stress protein (USP) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.6	99.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
9.2	99.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7	98.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.2	98.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.6	97.0	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	TaAffx.121396.1.S1_at	CA606074	-	-	5e-1	At1g38950	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.112290.2.S1_at	AJ614038	-	-	4e+0	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.94480.1.S1_at	BF484308	-	-	2e+1	At4g28181	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.54639.1.S1_at	CA678945	-	-	1e+0	At2g41225	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.110481.1.S1_x_at	CA658539	-	-	2e+1	At5g49015	Expressed protein	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.23667.1.S1_at	Y14008.1	gibberellin 20-oxidase	-	1e-2	At5g07200	YAP169	C.G.	S.X.	Please select
0.01	4e+0	32	Ta.21925.1.S1_at	CD905060	-	-	3e-3	At1g67830	ATFXG1 (alpha-fucosidase 1)	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.141.1.S1_at	AB005555.1	gibberellin 20-oxidase	-	3e-6	At4g25420	GA20OX1	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.141.1.S1_x_at	AB005555.1	gibberellin 20-oxidase	-	3e-6	At4g25420	GA20OX1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At3g05230	819687	signal peptidase subunit family protein	F:peptidase activity;P:signal peptide processing;C:endoplasmic reticulum, cell wall;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e+0	32	Glycine max	PsAffx.psMA002xM06f_at	PsAffx.psMA002xM06f	-	-	8e-1	At4g39940	AKN2 (APS-kinase 2)	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	HS09G23u_s_at	HS09G23u	-	-	1e+1	At5g16390	CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)	C.G.	S.X.	Please select
0.04	8e+0	32	Oryza sativa	OsAffx.17670.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.207140.1.S1_s_at	pmrna14166	cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450	-	5e-2	At3g52320	F-box family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1613334_at	CA817505	-	-	3e-1	At1g11840	ATGLX1 (GLYOXALASE I HOMOLOG)	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.9635.2.A1_x_at	CF623977	-	-	1e+1	At5g24570	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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