Gene omics information

Query gene ID	TaAffx.26634.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	98.9	TaAffx.26634.1.S1_at	CA686921	-	-	6e-1	At3g55646	unknown protein	S.X.	H.G.	Please select
0.41	59.6	Ta.14898.1.S1_at	CA684183	-	-	5e-1	At1g30845	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.9428.1.S1_at	BQ161850	-	-	3e-6	At1g49820	ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE)	S.X.	H.G.	Please select
0.39	56.1	TaAffx.66865.1.S1_at	CA707529	-	-	4e-3	At2g43940	thiol methyltransferase, putative	S.X.	H.G.	Please select
0.39	56.1	Ta.28406.1.A1_s_at	BJ275889	-	-	3e-1	At1g74650	MYB31 (MYB DOMAIN PROTEIN 31)	S.X.	H.G.	Please select
0.38	54.7	Ta.20812.1.S1_at	CA621715	-	-	2e-28	At3g18290	EMB2454 (embryo defective 2454)	S.X.	H.G.	Please select
0.37	53.0	Ta.11358.1.A1_at	BQ169936	-	-	9e-1	At5g21960	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.36	51.9	TaAffx.6399.1.S1_at	CA686602	-	-	2e+1	At5g12880	proline-rich family protein	S.X.	H.G.	Please select
0.36	51.9	Ta.11023.1.S1_at	CA606182	-	-	2e-15	At1g19700	BEL10 (BEL1-LIKE HOMEODOMAIN 10)	S.X.	H.G.	Please select
0.35	49.8	TaAffx.128471.1.S1_at	BG314138	-	-	1e-1	At1g44542	cyclase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.8	99.2	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.1	99.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.5	99.1	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.3	99.0	GSM250901	Tc_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.9	99.0	GSM250904	TcLr1_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.1	98.8	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.7	98.7	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250913	Tc_7dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.1	98.5	GSM143511	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.0	98.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-1	34	Ta.4938.1.S1_at	CK210229	IAA1 protein	-	2e-10	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.06	2e+0	32	TaAffx.38382.1.S1_s_at	BJ235350	-	-	1e-5	At2g20280	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.30442.1.S1_at	CA625263	-	-	7e-2	At1g25425	CLE43 (CLAVATA3/ESR-RELATED 43)	C.G.	S.X.	Please select
0.02	2e+0	32	Ta.5934.1.S1_at	CD888662	-	-	4e-15	At2g20280	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.05	2e+0	32	Ta.5934.2.S1_x_at	CA659454	-	-	2e-5	At2g20280	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.03	9e+0	30	TaAffx.27775.1.S1_at	CA670785	-	-	2e-9	At1g11410	S-locus protein kinase, putative	C.G.	S.X.	Please select
0.04	9e+0	30	TaAffx.111380.1.S1_at	CA641946	-	-	1e+0	At1g01130	unknown protein	C.G.	S.X.	Please select
0.02	9e+0	30	Ta.28012.1.S1_a_at	CD935151	-	-	2e-3	At3g50770	calmodulin-related protein, putative	C.G.	S.X.	Please select
0.02	9e+0	30	Ta.28012.1.S1_at	CD935151	-	-	2e-3	At3g50770	calmodulin-related protein, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	6e-1	34	Arabidopsis thaliana	At3g55646	3769719	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	8e-4	44	Glycine max	GmaAffx.69025.1.A1_at	BE661661	-	-	8e-1	At2g22720	-	C.G.	S.X.	Please select
0.04	3e-1	34	Hordeum vulgare	Contig15395_at	Contig15395	-	-	4e-3	At3g55646	unknown protein	C.G.	S.X.	Please select
0.05	3e-1	36	Oryza sativa	Os11g0195700	AK111008.1	-	Hypothetical protein	7e-3	At1g25425	CLE43 (CLAVATA3/ESR-RELATED 43)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-1	36	Populus trichocarpa	PtpAffx.204447.1.S1_at	pmrna8725	hypothetical protein	-	6e-3	At1g25425	CLE43 (CLAVATA3/ESR-RELATED 43)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+1	28	Vitis vinifera	1622075_at	CD799862	-	-	2e-16	At5g20990	B73	C.G.	S.X.	Please select
0.04	1e+1	28	Zea mays	ZmAffx.727.1.A1_at	AI739989	-	-	3e+0	At2g04480	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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