CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.26385.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 TaAffx.26385.1.S1_x_at CA689363 - - 4e+0 At5g25090 plastocyanin-like domain-containing protein S.X. H.G.
0.83 93.4 TaAffx.56013.1.S1_at CA658531 - - 6e-1 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) S.X. H.G.
0.80 92.2 TaAffx.108219.1.S1_at CA690622 - - 3e-1 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) S.X. H.G.
0.77 90.8 Ta.1977.2.A1_at BE231484 - - 1e+0 At3g07430 emb1990 (embryo defective 1990) S.X. H.G.
0.63 83.1 TaAffx.26385.1.S1_at CA689363 - - 4e+0 At5g25090 plastocyanin-like domain-containing protein S.X. H.G.
0.40 58.4 Ta.2825.3.S1_x_at CA655458 - - 4e+0 At5g25240 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.3 99.3 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
10.5 99.2 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
9.1 99.0 GSM298053 Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
8.4 98.9 GSM298068 Leaf tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
8.2 98.8 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.7 98.7 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5 98.6 GSM298056 Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
7.2 98.5 GSM298065 Leaf tissue of Paragon at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
6.4 98.2 GSM298089 Leaf tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.4 98.2 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.99 0 969 TaAffx.26385.1.S1_at CA689363 - - 4e+0 At5g25090 plastocyanin-like domain-containing protein C.G. S.X.
0.68 9e-97 353 TaAffx.28584.1.S1_x_at CA658565 - - 4e+0 At5g48485 DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1) C.G. S.X.
0.40 2e-91 335 Ta.2752.2.S1_x_at BE216923 - - 6e-13 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.79 5e-86 317 TaAffx.108219.1.S1_at CA690622 - - 3e-1 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.36 3e-69 262 Ta.2752.3.S1_x_at BJ266715 ribulosebisphosphate carboxylase small subunit - 8e-12 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.28 2e-48 192 Ta.27923.2.S1_x_at CK212552 small subunit - 3e-14 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.49 4e-37 155 TaAffx.7515.1.S1_at CA657572 - - 4e+0 At5g48485 DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1) C.G. S.X.
0.34 4e-28 125 TaAffx.7592.1.S1_at CA656084 - - 2e+1 At5g28820 unknown protein C.G. S.X.
0.31 6e-24 111 TaAffx.109620.1.S1_at CA672181 - - 2e+1 At5g39470 F-box family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g25090 832580 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;P - - - C.G. S.X.
0.03 6e+0 32 Glycine max GmaAffx.51760.1.S1_at BU577976 - - 2e-1 At2g27180 unknown protein C.G. S.X.
0.36 9e-80 295 Hordeum vulgare Contig859_s_at Contig859 - - 7e-16 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.25 4e-17 89 Oryza sativa Os12g0292400 AK070257.1 - Petunia ribulose 1,5-bisphosphate carboxylasesmall subunit mRNA (clone pSSU 51), partial cds.(Fragment) 3e-7 At1g67090 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) C.G. S.X.
0.03 2e+1 30 Populus trichocarpa PtpAffx.221710.1.S1_at pmrna38735 hypothetical protein - 4e-3 At3g26630 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.04 5e+0 30 Vitis vinifera 1615887_at CA812335 - - 3e+1 At5g25450 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.840.1.A1_at AI770592 - - 2e-1 At1g36940 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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