Gene omics information

Query gene ID TaAffx.25460.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8694.1TaAffx.25460.1.S1_atCA699644--4e+0At3g57500unknown proteinS.X.H.G.
0.4767.9TaAffx.57340.1.S1_atCA631443--2e+1At1g0940012-oxophytodienoate reductase, putativeS.X.H.G.
0.078.6TaAffx.45277.2.S1_atBJ269597--1e-6At3g53260PAL2S.X.H.G.
0.056.7TaAffx.129081.2.S1_s_atCA608630--2e-2At4g32714SCRL25 (SCR-Like 25)S.X.H.G.
0.034.7Ta.4920.1.S1_atBJ268955--3e-4At3g13050transporter-relatedS.X.H.G.
0.034.7Ta.29930.1.S1_atBJ273225--5e+0At5g60500undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family proteinS.X.H.G.
0.012.4TaAffx.52479.1.S1_atCA714716--8e-2At5g58990unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.499.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
17.699.7GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
15.399.6GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.999.3GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.099.1GSM143511Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.799.1GSM138148genotype F29 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.199.0GSM143516Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.099.0GSM143494Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.798.9GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.598.9GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-344Ta.4379.1.S1_atBJ248211--9e-2At1g17330metal-dependent phosphohydrolase HD domain-containing protein-relatedC.G.S.X.
0.062e-240TaAffx.23596.1.S1_atCA732895--7e-2At1g70210CYCD1C.G.S.X.
0.046e-238TaAffx.80553.1.S1_atCA695392--4e+0At3g08890unknown proteinC.G.S.X.
0.046e-238TaAffx.79731.1.S1_s_atBQ801610--1e+0At3g07630ADT2 (arogenate dehydratase 2)C.G.S.X.
0.046e-238TaAffx.66758.1.S1_x_atBG904414--4e+0At3g14360lipase class 3 family proteinC.G.S.X.
0.046e-238TaAffx.66758.1.S1_atBG904414--4e+0At3g14360lipase class 3 family proteinC.G.S.X.
0.046e-238Ta.9409.1.S1_atBQ838824--4e+0At1g70120unknown proteinC.G.S.X.
0.026e-238Ta.21984.1.S1_s_atBQ608862--2e-1At4g24640APPB1C.G.S.X.
0.042e-136TaAffx.83669.1.S1_atCA654470--2e+1At4g03420unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt3g57500824917unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB---C.G.S.X.
0.062e-240Glycine maxGmaAffx.52376.1.S1_atAI437972--3e-3At3g09770zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.043e-238Hordeum vulgareContig1434_s_atContig1434--2e-1At5g58580ATL63 (ARABIDOPSIS TÓC.G.S.X.
0.174e-29129Oryza sativaOs02g0193000AK108910.1-Peptidoglycan-binding LysM domain containingprotein1e-1At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.48509.1.A1_atBP933830--4e+0At5g16380unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1611981_atCF403805--6e-2At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinC.G.S.X.
0.031e-136Zea maysZm.18825.1.A1_atCO527281hypothetical protein LOC100194340-8e+0At3g17675copper ion binding / electron carrierC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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