Gene omics information

Query gene ID	TaAffx.24685.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	TaAffx.24685.1.S1_at	CA714323	-	-	3e+0	At2g36080	DNA-binding protein, putative	S.X.	H.G.	Please select
0.77	90.8	Ta.5523.2.S1_a_at	BJ243328	-	-	4e+0	At5g47600	heat shock protein-related	S.X.	H.G.	Please select
0.55	76.8	TaAffx.38217.1.S1_x_at	BJ244494	-	-	7e+0	At5g11690	ATTIM17-3	S.X.	H.G.	Please select
0.50	72.4	Ta.2167.3.S1_a_at	CA647226	-	-	3e-13	At3g06050	PRXIIF (PEROXIREDOXIN IIF)	S.X.	H.G.	Please select
0.32	44.4	TaAffx.38217.1.S1_at	BJ244494	-	-	7e+0	At5g11690	ATTIM17-3	S.X.	H.G.	Please select
0.29	39.2	TaAffx.78517.1.S1_at	CA731451	-	-	4e+0	At2g25720	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.4	99.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.5	99.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.0	99.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.6	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.6	99.1	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	848	TaAffx.24685.1.S1_x_at	CA714323	-	-	3e+0	At2g36080	DNA-binding protein, putative	C.G.	S.X.	Please select
0.03	6e-2	38	Ta.10618.1.S1_at	BQ166126	-	-	6e+0	At5g16200	50S ribosomal protein-related	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.85978.1.S1_at	CA617899	-	-	2e+1	At5g41685	mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1)	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.83097.1.S1_at	CA662094	-	-	7e-2	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.78940.1.S1_at	CA724277	-	-	3e+0	At2g31018	unknown protein	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.66072.1.S1_at	CA600692	-	-	4e+0	At3g29560	unknown protein	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.23910.2.S1_at	CA611695	-	-	4e+0	At4g20325	unknown protein	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.121250.1.S1_at	BG906548	-	-	2e-1	At5g24460	unknown protein	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.112078.1.S1_at	CA627261	-	-	4e-3	At5g59570	myb family transcription factor	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At2g36080	818181	DNA-binding protein, putative	Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.70107.1.S1_at	BU964567	-	-	2e-4	At1g68060	ATMAP70-1 (microtubule-associated proteins 70-1)	C.G.	S.X.	Please select
0.03	4e-1	34	Hordeum vulgare	Contig18843_at	Contig18843	-	-	3e-2	At4g31580	SRZ-22	C.G.	S.X.	Please select
0.04	1e-1	38	Oryza sativa	OsAffx.5278.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	5e+0	32	Populus trichocarpa	PtpAffx.219608.1.S1_at	pmrna35567	-	-	2e+0	At3g61660	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-1	34	Vitis vinifera	1616213_at	CF212769	-	-	3e-7	At2g03670	CDC48B	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.873.1.A1_at	AI770779	-	-	5e-2	At4g30460	glycine-rich protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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