Gene omics information

Query gene ID TaAffx.24426.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6182.0TaAffx.24426.1.S1_atCA719619--3e+0At5g44430PDF1.2c (plant defensin 1.2c)S.X.H.G.
0.4666.8TaAffx.111137.1.S1_atCA647309--9e-1At5g10730binding / catalytic/ coenzyme bindingS.X.H.G.
0.4565.2Ta.27051.1.A1_atBT009440.1--1e-3At4g09020ISA3 (ISOAMYLASE 3)S.X.H.G.
0.4464.5Ta.26199.3.S1_x_atCA610969--3e-1At3g17100transcription factorS.X.H.G.
0.3549.8Ta.11853.2.S1_x_atCA666021--4e+0At5g47080CKB1S.X.H.G.
0.3346.9Ta.20317.1.S1_x_atCA678146--4e+0At5g5985040S ribosomal protein S15A (RPS15aF)S.X.H.G.
0.3040.9TaAffx.57312.1.S1_atCA632121--7e-2At5g37550unknown proteinS.X.H.G.
0.3040.9Ta.24621.2.S1_x_atCA640800--4e+0At5g47080CKB1S.X.H.G.
0.2839.2Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinS.X.H.G.
0.2532.1Ta.6666.2.S1_a_atCA640317--5e-12At3g49420Got1-like family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.099.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.098.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.998.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.898.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.097.4GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.797.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.697.0GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.196.4GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.196.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.996.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.523e-71268TaAffx.106823.1.S1_x_atCA710938--4e+0At5g55570unknown proteinC.G.S.X.
0.523e-71268TaAffx.106823.1.S1_atCA710938--4e+0At5g55570unknown proteinC.G.S.X.
0.333e-59228Ta.8965.3.S1_atCF182122--6e+0At4g33560unknown proteinC.G.S.X.
0.257e-1787Ta.6811.1.A1_atBJ305730--1e+0At5g19729unknown proteinC.G.S.X.
0.082e-1169Ta.8965.1.S1_a_atBJ319766--2e+0At1g68490unknown proteinC.G.S.X.
0.082e-1169Ta.8965.1.S1_atBJ319766--2e+0At1g68490unknown proteinC.G.S.X.
0.122e-446Ta.8192.1.A1_atBQ161573--2e+0At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)C.G.S.X.
0.051e-240Ta.16971.1.S1_atCA616197--1e+0At3g14620CYP72A8C.G.S.X.
0.049e-134TaAffx.26357.1.S1_atCA689546--4e+0At3g24506unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e+032Arabidopsis thalianaAt5g44430834470PDF1.2c (plant defensin 1.2c)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.---C.G.S.X.
0.031e+034Glycine maxPsAffx.C1000080_atPsAffx.C1000080--2e-2At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.042e+032Hordeum vulgareHF08A16r_x_atHF08A16r--3e+0At5g38180protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.057e-342Oryza sativaOs11g02141009639.m01021-Histidine-rich glycoprotein precursor3e+0At5g23100unknown proteinC.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.159704.1.A1_atCV262377hypothetical protein-6e-1At2g22080unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1614122_atCF414693--1e+1At5g20450-C.G.S.X.
0.046e+030Zea maysZmAffx.745.1.A1_atAI745776--3e+0At5g17650glycine/proline-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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