Gene omics information

Query gene ID	TaAffx.23015.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	TaAffx.23015.1.S1_at	CA741744	-	-	1e+0	At1g63390	flavin-containing monooxygenase-related / FMO-related	S.X.	H.G.	Please select
0.63	83.1	Ta.20696.3.S1_x_at	CA598744	-	-	4e+0	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	S.X.	H.G.	Please select
0.46	66.8	TaAffx.5578.1.S1_at	CA706153	-	-	3e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.3696.2.S1_x_at	CA723776	-	-	2e-1	At2g29125	RTFL2 (ROTUNDIFOLIA LIKE 2)	S.X.	H.G.	Please select
0.44	64.5	Ta.24112.2.S1_x_at	CA728131	-	-	3e-1	At2g41225	unknown protein	S.X.	H.G.	Please select
0.39	56.1	TaAffx.5529.1.S1_at	CA707923	-	-	3e+0	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	S.X.	H.G.	Please select
0.37	53.0	TaAffx.13113.2.S1_s_at	CA724231	-	-	1e+1	At5g66005	Expressed protein	S.X.	H.G.	Please select
0.33	46.9	TaAffx.106641.1.S1_at	CA710984	-	-	4e+0	At5g17290	APG5 (AUTOPHAGY 5)	S.X.	H.G.	Please select
0.30	40.9	Ta.20696.3.S1_s_at	CA598744	-	-	4e+0	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	S.X.	H.G.	Please select
0.24	30.3	Ta.5627.3.S1_x_at	CA696907	-	-	3e-1	At5g57000	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.2	99.6	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
14.1	99.5	GSM138160	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.1	99.3	GSM138150	genotype H10 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.5	99.2	GSM138158	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.1	99.2	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.8	99.1	GSM111227	genotype F48 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
9.5	99.1	GSM138164	genotype D15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.3	99.0	GSM138170	genotype C31 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.5	98.9	GSM138187	genotype F38b developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.9	98.7	GSM111225	genotype A81 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	5e-3	42	TaAffx.58478.1.S1_at	CA619301	-	-	1e-8	At3g52990	pyruvate kinase, putative	C.G.	S.X.	Please select
0.03	7e-2	38	TaAffx.65278.1.S1_at	BJ252994	-	-	4e-1	At3g13130	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	38	TaAffx.37962.1.S1_at	BJ257099	-	-	1e+0	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	7e-2	38	TaAffx.24925.1.S1_at	CA709878	-	-	4e+0	At5g02120	OHP (ONE HELIX PROTEIN)	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.17009.1.S1_at	CA616715	-	-	8e+0	At3g17550	NLI interacting factor (NIF) family protein	C.G.	S.X.	Please select
0.02	3e-1	36	TaAffx.61713.1.S1_at	CA685223	-	-	2e+0	At3g17460	PHD finger family protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.31196.1.S1_at	CA618606	-	-	8e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.11894.1.S1_at	BJ315515	-	-	4e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.114300.1.S1_at	CA595423	-	-	2e+1	At5g51110	4-alpha-hydroxytetrahydrobiopterin dehydratase	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At1g63390	842645	flavin-containing monooxygenase-related / FMO-related	F:electron carrier activity, oxidoreductase activity, monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	PsAffx.CL1076Contig1_at	PsAffx.CL1076Contig1	-	-	2e+0	At3g50900	unknown protein	C.G.	S.X.	Please select
0.04	3e-2	38	Hordeum vulgare	Contig12522_at	Contig12522	-	-	4e-11	At3g04880	DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)	C.G.	S.X.	Please select
0.18	4e-57	222	Oryza sativa	Os03g0175200	9631.m00726	-	Mitochondrial carrier protein family protein	1e-2	At5g26200	mitochondrial substrate carrier family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.65151.1.A1_at	CK092992	-	-	4e+0	At5g43570	serine-type endopeptidase inhibitor	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	8e-2	36	Vitis vinifera	1610103_at	CF213256	-	-	2e-1	At1g07745	RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D)	C.G.	S.X.	Please select
0.03	3e-2	38	Zea mays	Zm.15461.1.A1_at	CD219371	hypothetical protein LOC100272276	-	3e-1	At4g32030	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage