Gene omics information

Query gene ID TaAffx.22560.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.22560.1.S1_atCA656572--2e-4At5g62640proline-rich family proteinS.X.H.G.
0.4464.5Ta.359.3.S1_x_atCA685131--2e-1At3g28140calmodulin-binding proteinS.X.H.G.
0.4464.5Ta.359.1.S1_a_atBJ263340--3e-7At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)S.X.H.G.
0.4464.5Ta.359.2.S1_x_atCD863544--3e-15At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)S.X.H.G.
0.3142.7Ta.11642.1.S1_atBQ170513--1e+0Atmg00610-S.X.H.G.
0.023.6TaAffx.72723.1.S1_s_atBE427906--7e+0At5g56170-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.299.5GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
11.499.3GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
10.399.2GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
10.299.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
8.098.8GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.598.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.197.5GSM111193genotype F38a developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.097.4GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
4.296.6GSM246385SB165_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
3.695.6GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136TaAffx.113517.1.S1_atCA610453--1e+0At4g21216unknown proteinC.G.S.X.
0.032e-136Ta.4372.1.A1_atBJ250463--7e+0At5g05100nucleic acid bindingC.G.S.X.
0.042e-136Ta.20745.2.A1_a_atCA500388--9e-1At4g21216unknown proteinC.G.S.X.
0.039e-134TaAffx.64362.1.S1_atBJ302823--4e+0At2g26865-C.G.S.X.
0.049e-134TaAffx.32297.1.S1_atCA597365--7e-2At4g16830nuclear RNA-binding protein (RGGA)C.G.S.X.
0.039e-134Ta.25250.1.A1_atCD454945--7e-18At1g27440GUT2C.G.S.X.
0.049e-134Ta.13105.1.A1_atCD491191--3e+0At5g48170SLY2 (SLEEPY2)C.G.S.X.
0.034e+032TaAffx.31915.1.S1_atCA605338--1e+0At4g27654unknown proteinC.G.S.X.
0.044e+032TaAffx.113908.1.S1_atCA601683--6e-1At5g55508unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-446Arabidopsis thalianaAt5g62640836385proline-rich family proteinnuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC---C.G.S.X.
0.042e-240Glycine maxGma.18033.1.S1_atBM954206--1e+0At5g42960unknown proteinC.G.S.X.
0.296e-167585Hordeum vulgareContig6525_atContig6525--1e-3At5g62640proline-rich family proteinC.G.S.X.
0.045e-136Oryza sativaOsAffx.19300.1.S1_at---0C.G.S.X.
0.041e-344Populus trichocarpaPtpAffx.79585.2.S1_s_atCV245428--3e-1At4g21216unknown proteinC.G.S.X.
0.043e-134Vitis vinifera1621705_atCF413658--2e-1At2g18390TTN5 (TITAN 5)C.G.S.X.
0.054e-134Zea maysZmAffx.1069.1.A1_atAI941949RING-H2 finger protein ATL2K-6e+0At5g12380annexin, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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