Gene omics information

Query gene ID TaAffx.19661.2.S1_at
Gene name MADS-box transcription factor
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.1TaAffx.19661.2.S1_atCA727417MADS-box transcription factor-8e-4At4g11880AGL14 (agamous-like 14)S.X.H.G.
0.4058.4Ta.3414.2.S1_atBJ259743--3e-7At2g42010PLDBETA1 (PHOSPHOLIPASE D BETA 1)S.X.H.G.
0.3753.0TaAffx.4772.1.S1_atCA732425--2e+1At5g39240unknown proteinS.X.H.G.
0.3346.9Ta.2937.3.S1_x_atBJ207642--1e+0At5g42330unknown proteinS.X.H.G.
0.3244.4Ta.10107.3.S1_x_atBJ304072--1e-3At1g06020pfkB-type carbohydrate kinase family proteinS.X.H.G.
0.3040.9TaAffx.9336.1.S1_s_atCA602114--1e+0At5g51040unknown proteinS.X.H.G.
0.2939.2TaAffx.5025.1.S1_x_atCA724942--6e-5At4g04950thioredoxin family proteinS.X.H.G.
0.2532.1TaAffx.105475.1.S1_atCA643192--1e+0At1g14620DECOY (DECOY)S.X.H.G.
0.2430.3TaAffx.122554.1.S1_atBE499458--5e+0At4g02770PSAD-1 (photosystem I subunit D-1)S.X.H.G.
0.2329.0Ta.7861.1.S1_atCD922623--2e+0At3g63010GID1B (GA INSENSITIVE DWARF1B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.799.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
17.799.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.899.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.899.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.299.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.499.2GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.497.7GSM138188genotype F38a developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.695.6GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat development
3.495.2GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat development
3.395.0GSM138164genotype D15 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.291e-107389TaAffx.19661.1.S1_atBJ239393MADS-box transcription factor-4e-5At4g11880AGL14 (agamous-like 14)C.G.S.X.
0.175e-30131Ta.25343.1.A1_atCD374116MADS-box transcription factor TaAGL7-1e-7At2g45660AGL20 (AGAMOUS-LIKE 20)C.G.S.X.
0.136e-1477Ta.27569.1.A1_atCD890142MADS-box transcription factor TaAGL35-8e-2At5g51870AGL71 (AGAMOUS-LIKE 71)C.G.S.X.
0.136e-1477Ta.27569.1.S1_atCD888059MADS-box transcription factor TaAGL35-8e-2At5g51870AGL71 (AGAMOUS-LIKE 71)C.G.S.X.
0.121e-859TaAffx.143995.19.A1_atAY188333--2e-2At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.121e-859TaAffx.143995.19.S1_atAY188333MIKC-type MADS-box transcription factor WM19A-2e-2At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.151e-859TaAffx.120063.1.S1_atCF134093MADS-box transcription factor TaAGL10-4e-7At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.181e-859TaAffx.120063.2.S1_s_atBJ245749MADS-box transcription factor TaAGL10-3e-7At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.081e-859Ta.777.1.S1_atAB007505.1MADS box transcription factor-1e-5At3g61120AGL13 (AGAMOUS-LIKE 13)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.108e-444Arabidopsis thalianaAt4g11880826795AGL14 (agamous-like 14)AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.---C.G.S.X.
0.041e+034Glycine maxGmaAffx.1338.1.S1_atBI967589--1e+0At5g16453-C.G.S.X.
0.144e-1063Hordeum vulgareContig3831_atContig3831--3e-15At4g18960AG (AGAMOUS)C.G.S.X.
0.286e-40165Oryza sativaOs.49760.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.67727.1.A1_atDN486398hypothetical protein-8e-1At1g52315unknown proteinC.G.S.X.
0.066e-236Vitis vinifera1614418_atCF414182flowering-related B-class MADS-box protein-9e-15At3g54340AP3 (APETALA 3)C.G.S.X.
0.205e-28123Zea maysZm.15830.1.A1_atAI491392--3e-5At4g22950AGL19 (AGAMOUS-LIKE 19)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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