Gene omics information

Query gene ID	TaAffx.19604.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	TaAffx.19604.1.A1_at	BJ309279	-	-	3e-1	At5g47090	unknown protein	S.X.	H.G.	Please select
0.29	39.2	Ta.30888.1.S1_at	CN011455	-	-	1e+0	At1g05920	DNA binding	S.X.	H.G.	Please select
0.23	29.0	Ta.22398.1.S1_at	CA597140	-	-	8e+0	At5g20100	unknown protein	S.X.	H.G.	Please select
0.13	14.6	TaAffx.72097.1.S1_at	BJ260927	-	-	8e+0	At5g41450	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.10	11.3	Ta.2818.1.S1_x_at	BJ319737	-	-	6e-1	At1g53260	unknown protein	S.X.	H.G.	Please select
0.10	11.3	TaAffx.11289.1.S1_at	CA631316	-	-	3e+0	At5g38310	unknown protein	S.X.	H.G.	Please select
0.08	9.4	Ta.10642.1.S1_at	CA612878	-	-	1e+0	At4g17900	zinc-binding family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.3	97.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM111229	genotype B65 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.2	94.8	GSM138152	genotype G32 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1	94.5	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.1	94.5	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.60	4e-102	371	TaAffx.19604.2.A1_at	BJ320714	-	-	3e-1	At1g20220	nucleic acid binding	C.G.	S.X.	Please select
0.41	2e-48	192	TaAffx.19604.4.S1_at	CA652969	-	-	1e+0	At1g69760	unknown protein	C.G.	S.X.	Please select
0.30	8e-48	190	TaAffx.19604.5.S1_at	CA744155	-	-	3e+0	At3g20900	unknown protein	C.G.	S.X.	Please select
0.16	1e-40	167	Ta.24120.2.S1_at	BJ264522	-	-	1e-2	At1g68140	-	C.G.	S.X.	Please select
0.04	5e-6	52	Ta.14556.3.A1_at	CD373792	-	-	5e-8	At2g26760	CYCB1	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.5357.1.S1_at	CA713422	-	-	5e-1	At2g23320	WRKY15	C.G.	S.X.	Please select
0.01	3e-1	36	TaAffx.143995.8.A1_at	AY485644	-	-	2e-2	At2g29500	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	C.G.	S.X.	Please select
0.01	3e-1	36	TaAffx.143995.8.S1_at	AY485644	-	-	2e-2	At2g29500	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.10310.3.S1_at	CK154278	-	-	3e+0	At1g11850	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	Arabidopsis thaliana	At5g47090	834755	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	Gma.3604.4.S1_s_at	BI317410	-	-	5e-8	At4g34050	caffeoyl-CoA 3-O-methyltransferase, putative	C.G.	S.X.	Please select
0.21	2e-43	174	Hordeum vulgare	Contig3323_at	Contig3323	-	-	2e-1	At5g52200	unknown protein	C.G.	S.X.	Please select
0.12	9e-9	61	Oryza sativa	Os02g0125300	AB025926.3	-	Bax inhibitor-1 (BI-1) (OsBI-1)	2e-4	At5g47120	ATBI1 (BAX INHIBITOR 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.101597.1.A1_at	CV258575	hypothetical protein	-	1e-10	At5g53570	RabGAP/TBC domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	8e-2	36	Vitis vinifera	1608560_at	CF405443	hypothetical protein LOC100250989	-	3e+0	At3g09890	ankyrin repeat family protein	C.G.	S.X.	Please select
0.05	1e-1	36	Zea mays	Zm.12293.1.S1_at	CN844282	hypothetical protein LOC100272936	-	2e-1	At3g17160	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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