Gene omics information

Query gene ID	TaAffx.1833.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.78	91.1	TaAffx.1833.1.S1_at	BJ239476	-	-	5e-1	At4g37409	unknown protein	S.X.	H.G.	Please select
0.29	39.2	Ta.7373.1.S1_at	CK197072	-	-	2e-1	At3g08640	alphavirus core protein family	S.X.	H.G.	Please select
0.26	33.6	TaAffx.83970.1.S1_at	CA647111	-	-	7e-2	At3g10525	-	S.X.	H.G.	Please select
0.25	32.1	Ta.1074.1.S1_x_at	BE516304	-	-	5e-1	At2g04340	unknown protein	S.X.	H.G.	Please select
0.23	29.0	TaAffx.31511.1.S1_at	BJ284978	-	-	2e-6	At2g42670	unknown protein	S.X.	H.G.	Please select
0.22	27.1	TaAffx.6430.1.S1_at	CA686025	-	-	3e-4	At3g04460	PEX12	S.X.	H.G.	Please select
0.22	27.1	Ta.4372.1.A1_at	BJ250463	-	-	7e+0	At5g05100	nucleic acid binding	S.X.	H.G.	Please select
0.20	24.0	Ta.1705.3.S1_a_at	CA729787	-	-	4e-3	At3g48870	HSP93-III	S.X.	H.G.	Please select
0.14	15.8	Ta.5602.1.A1_at	BJ286052	-	-	5e+0	At3g02480	ABA-responsive protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.8	97.9	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.1	97.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.7	97.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.3	96.7	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.2	96.6	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.8	96.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	1e-44	180	Ta.28013.1.S1_x_at	CA612607	-	-	2e-3	At4g13100	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.27	8e-43	174	Ta.14605.1.S1_at	BQ838001	-	-	3e-1	At5g64160	unknown protein	C.G.	S.X.	Please select
0.04	2e-3	44	TaAffx.57652.1.S1_at	CA626274	-	-	1e-9	At4g17310	unknown protein	C.G.	S.X.	Please select
0.08	2e-3	44	TaAffx.38872.1.A1_at	CK211140	-	-	2e+0	At2g45050	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.04	2e-3	44	Ta.18166.1.S1_at	CA630604	-	-	5e-2	At2g39530	integral membrane protein, putative	C.G.	S.X.	Please select
0.03	8e-3	42	TaAffx.9388.1.S1_at	CA600190	-	-	3e-1	At4g25730	FtsJ-like methyltransferase family protein	C.G.	S.X.	Please select
0.03	8e-3	42	TaAffx.27430.1.S1_at	CA676821	-	-	8e-1	At5g64400	-	C.G.	S.X.	Please select
0.04	3e-2	40	TaAffx.92615.1.S1_at	BJ256655	-	-	2e+1	At5g50361	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	40	TaAffx.78616.1.S1_x_at	CA730034	-	-	4e-3	At2g23320	WRKY15	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-1	36	Arabidopsis thaliana	At4g37409	6240256	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	34	Glycine max	PsAffx.psZG008xI07f_at	PsAffx.psZG008xI07f	-	-	6e-1	At5g25940	early nodulin-related	C.G.	S.X.	Please select
0.24	3e-37	155	Hordeum vulgare	Contig10671_at	Contig10671	-	-	4e-1	At5g64160	unknown protein	C.G.	S.X.	Please select
0.14	1e-18	95	Oryza sativa	Os04g0118500	9632.m00190	-	Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8)(Rotamase Pin1) (PPIase Pin1) (DlPar13)	3e-1	At5g64160	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-1	36	Populus trichocarpa	PtpAffx.223802.1.S1_at	pmrna41993	hypothetical protein	-	1e+1	At5g44650	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e-4	44	Vitis vinifera	1618406_at	CB914237	-	-	1e+0	At5g61110	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.08	1e-2	40	Zea mays	Zm.1551.1.A1_at	BM339714	peptidyl-prolyl cis-trans isomerase 1	-	6e-3	At2g18040	PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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